RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 UNCXA6NJT0 531 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 ARF4P18085 180 aaPredicted RBP16.15■□□□□ 0.18
USH1C-207ENST00000527720 CDH8P55286 799 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 TMEM132DQ14C87 1099 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 RNF187Q5TA31 235 aaPredicted RBP16.15■□□□□ 0.18
USH1C-207ENST00000527720 BBS12Q6ZW61 710 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 PIGWQ7Z7B1 504 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 ANKS4BQ8N8V4 417 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 JOSD2Q8TAC2 188 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 ELOVL4Q9GZR5 314 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 MIS12Q9H081 205 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 SMYD3Q9H7B4 428 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 SCN4AP35499 1836 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 STRNO43815 780 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 MICAL2O94851 1124 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 EPHX2P34913 555 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 GJA5P36382 358 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 GPS1Q13098 491 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 CCDC142Q17RM4 750 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 CCDC38Q502W7 563 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 MTHFD1LQ6UB35 978 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 CCDC197Q8NCU1 140 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 HPDLQ96IR7 371 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 PWWP2AQ96N64 755 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 PPCSQ9HAB8 311 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 EURLQ9NYK6 297 aa16.15■□□□□ 0.18
USH1C-207ENST00000527720 TMEM120BA0PK00 339 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ERBB2P04626 1255 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 KDELR1P24390 212 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 RDXP35241 583 aaKnown RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 NR1H3Q13133 447 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ITIH4Q14624 930 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 RNASEH2BQ5TBB1 312 aaKnown RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 VSTM1Q6UX27 236 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ILDR2Q71H61 639 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 TDRPQ86YL5 185 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ARFGAP1Q8N6T3 406 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 GLIS1Q8NBF1 620 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 C9orf72Q96LT7 481 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 TWNKQ96RR1 684 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 METTL5Q9NRN9 209 aaKnown RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 BARX2Q9UMQ3 279 aaPredicted RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 RNF8O76064 485 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ADORA2AP29274 412 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 GPD2P43304 727 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 RBP5P82980 135 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ACTN3Q08043 901 aaPredicted RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 LACTB2Q53H82 288 aaPredicted RBP16.14■□□□□ 0.17
USH1C-207ENST00000527720 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 CPB2Q96IY4 423 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ACAP3Q96P50 834 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 SAMD15Q9P1V8 674 aa16.14■□□□□ 0.17
USH1C-207ENST00000527720 GOLGA6L7A0A1B0GV03 622 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 M0QYV0 167 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 SGK1O00141 431 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 CYP2C8P10632 490 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 PECAM1P16284 738 aaPredicted RBP16.13■□□□□ 0.17
USH1C-207ENST00000527720 PCK1P35558 622 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 PLCB3Q01970 1234 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 MYO1EQ12965 1108 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 STILQ15468 1287 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 PRUNE1Q86TP1 453 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 PACS2Q86VP3 889 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 LRRC34Q8IZ02 419 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 CMASQ8NFW8 434 aaPredicted RBP16.13■□□□□ 0.17
USH1C-207ENST00000527720 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 SLC10A4Q96EP9 437 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 KATNBL1Q9H079 304 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 KDM4CQ9H3R0 1056 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 ZWILCHQ9H900 591 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 SAYSD1Q9NPB0 183 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 ASNSD1Q9NWL6 643 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 TJP2Q9UDY2 1190 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 NAALADL1Q9UQQ1 740 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 CAPN7Q9Y6W3 813 aa16.13■□□□□ 0.17
USH1C-207ENST00000527720 PDCD11Q14690 1871 aaKnown RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 A0A1B0GUA9 196 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 SMAPO00193 183 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 ALOX15BO15296 676 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 TSPAN1O60635 241 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 VTNP04004 478 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 GHRP10912 638 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 IL1R2P27930 398 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 CENPUQ71F23 418 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 KIAA0319LQ8IZA0 1049 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 DYDC1Q8WWB3 177 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 ACSF2Q96CM8 615 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 TMEM121Q9BTD3 319 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.12■□□□□ 0.17
USH1C-207ENST00000527720 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
USH1C-207ENST00000527720 CTNNAL1Q9UBT7 734 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms