RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 KCNK3O14649 394 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 TUBBP07437 444 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 PDGFRBP09619 1106 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ODC1P11926 461 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
SMPD1-203ENST00000527275 PAX3P23760 479 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 HTRA4P83105 476 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-203ENST00000527275 BRD3Q15059 726 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 TCEAL1Q15170 157 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 PTPROQ16827 1216 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 SPOUT1Q5T280 376 aaKnown RBP19.9■□□□□ 0.78
SMPD1-203ENST00000527275 NT5DC3Q86UY8 548 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ZNF677Q86XU0 584 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 HERC6Q8IVU3 1022 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ZSWIM1Q9BR11 485 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 SNX25Q9H3E2 840 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 CTTNBP2NLQ9P2B4 639 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 COG5Q9UP83 839 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 GABRDO14764 452 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ACAD10Q6JQN1 1059 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ACOT1Q86TX2 421 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 OSTM1Q86WC4 334 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 TMEM86AQ8N2M4 240 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 MMGT1Q8N4V1 131 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ZNF606Q8WXB4 792 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 TFAP2BQ92481 460 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 PBKQ96KB5 322 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 CALR3Q96L12 384 aaKnown RBP19.9■□□□□ 0.78
SMPD1-203ENST00000527275 SLC9A7Q96T83 725 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 GPR62Q9BZJ7 368 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 MTIF3Q9H2K0 278 aaKnown RBP19.9■□□□□ 0.78
SMPD1-203ENST00000527275 ABCB6Q9NP58 842 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 AMFRQ9UKV5 643 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 INSL6Q9Y581 213 aa19.9■□□□□ 0.78
SMPD1-203ENST00000527275 CDH23Q9H251 3354 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 CCDC151A5D8V7 595 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 CES2O00748 559 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 TRAPPC3O43617 180 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 PAEPP09466 180 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 CD19P15391 556 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 WARSP23381 471 aaKnown RBP19.89■□□□□ 0.77
SMPD1-203ENST00000527275 HADHBP55084 474 aaKnown RBP19.89■□□□□ 0.77
SMPD1-203ENST00000527275 RASIP1Q5U651 963 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 CC2D1AQ6P1N0 951 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-203ENST00000527275 UNC93AQ86WB7 457 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 C12orf29Q8N999 325 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 PHOSPHO2Q8TCD6 241 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 BCL7CQ8WUZ0 217 aaPredicted RBP19.89■□□□□ 0.77
SMPD1-203ENST00000527275 HEXIM2Q96MH2 286 aaKnown RBP19.89■□□□□ 0.77
SMPD1-203ENST00000527275 DPEP3Q9H4B8 488 aa19.89■□□□□ 0.77
SMPD1-203ENST00000527275 THAP12O43422 761 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 BRD2P25440 801 aaKnown RBP19.88■□□□□ 0.77
SMPD1-203ENST00000527275 SSTR3P32745 418 aaPredicted RBP19.88■□□□□ 0.77
SMPD1-203ENST00000527275 CLEC16AQ2KHT3 1053 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 SMYD5Q6GMV2 418 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 KCNT2Q6UVM3 1135 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 DDX43Q9NXZ2 648 aaKnown RBP19.88■□□□□ 0.77
SMPD1-203ENST00000527275 CYP11A1P05108 521 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 CFHP08603 1231 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 FAM163BP0C2L3 166 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 ACAT1P24752 427 aaKnown RBP19.88■□□□□ 0.77
SMPD1-203ENST00000527275 HES6Q96HZ4 224 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 ARFGAP3Q9NP61 516 aa19.88■□□□□ 0.77
SMPD1-203ENST00000527275 ZRANB2O95218 330 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 LHX1P48742 406 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 VSNL1P62760 191 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 SHHQ15465 462 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 FAM171A1Q5VUB5 890 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 RAD9AQ99638 391 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 LPIN3Q9BQK8 851 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 SELENOOQ9BVL4 669 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 DSEQ9UL01 958 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 SF3B1O75533 1304 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 TARSL2A2RTX5 802 aaKnown RBP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 TLL1O43897 1013 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 SEC31AO94979 1220 aaKnown RBP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 UNGP13051 313 aaPredicted RBP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 TKTP29401 623 aaKnown RBP19.87■□□□□ 0.77
SMPD1-203ENST00000527275 CCDC70Q6NSX1 233 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 WDR93Q6P2C0 686 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 FUT10Q6P4F1 479 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 IGSF21Q96ID5 467 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 B3GALT6Q96L58 329 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 PCDHB8Q9UN66 801 aa19.87■□□□□ 0.77
SMPD1-203ENST00000527275 TNRC18O15417 2968 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 ATP2C2O75185 946 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 CYP1A2P05177 515 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 TYMPP19971 482 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 RNASE9P60153 205 aaKnown RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 PSMC1P62191 440 aaKnown RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 YWHAHQ04917 246 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 KIAA0319Q5VV43 1072 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 OVOS1Q6IE37 1185 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 CEP57Q86XR8 500 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 CRYBG2Q8N1P7 616 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 HNRNPLLQ8WVV9 542 aaKnown RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 ZNF653Q96CK0 615 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 ZNF558Q96NG5 402 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 RTP3Q9BQQ7 232 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms