RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 MBD1Q9UIS9 605 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 KCNG1Q9UIX4 513 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 DSEQ9UL01 958 aa17.57■□□□□ 0.4
CHMP4A-203ENST00000527154 NOL4O94818 638 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 CD59P13987 128 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 MRPS21P82921 87 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 PPP2R3AQ06190 1150 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 COL28A1Q2UY09 1125 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 KIAA1958Q8N8K9 716 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 ADAMTS14Q8WXS8 1223 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 MRPS31Q92665 395 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 GTF3C6Q969F1 213 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 SCUBE2Q9NQ36 999 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 GCNT4Q9P109 453 aa17.56■□□□□ 0.4
CHMP4A-203ENST00000527154 BPTFQ12830 3046 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 A0A0A0MRY4 1105 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 E9PMD0 336 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 GJB3O75712 270 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 PIGRP01833 764 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 CSH1P0DML2 217 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 CSH2P0DML3 217 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 PLS3P13797 630 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 MAPK8P45983 427 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 STRN3Q13033 797 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 HSF5Q4G112 596 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 C19orf48Q6RUI8 117 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 CCNI2Q6ZMN8 369 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 DNAAF2Q9NVR5 837 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 DKK4Q9UBT3 224 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 WNT6Q9Y6F9 365 aa17.55■□□□□ 0.4
CHMP4A-203ENST00000527154 SERPINF2P08697 491 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 KCNK18Q7Z418 384 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 CD302Q8IX05 232 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 EFCAB13Q8IY85 973 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 FRMD1Q8N878 549 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 CEP76Q8TAP6 659 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 LINC00597Q9H2U6 94 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 TMLHEQ9NVH6 421 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 LRWD1Q9UFC0 647 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 SLC6A14Q9UN76 642 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 DNM3Q9UQ16 869 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 DERAQ9Y315 318 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 SCN1AP35498 2009 aa17.54■□□□□ 0.4
CHMP4A-203ENST00000527154 ZNF638Q14966 1978 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 PLXNB3Q9ULL4 1909 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 SFI1A8K8P3 1242 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 OGTO15294 1046 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 IFNAR2P48551 515 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ZXDBP98169 803 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 NR1H3Q13133 447 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 PSMD2Q13200 908 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ZNF174Q15697 407 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 TAF12Q16514 161 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ME3Q16798 604 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 C2orf27AQ580R0 203 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 LYSMD4Q5XG99 296 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 TMEFF1Q8IYR6 380 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 IL17RCQ8NAC3 791 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 SNX29Q8TEQ0 813 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 WHAMMQ8TF30 809 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 RLN3Q8WXF3 142 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 PKMYT1Q99640 499 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 MMTAG2Q9BU76 263 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ABCB6Q9NP58 842 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 UXTQ9UBK9 157 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 CPSF3Q9UKF6 684 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ARHGAP26Q9UNA1 814 aa17.53■□□□□ 0.4
CHMP4A-203ENST00000527154 ANK1P16157 1881 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 ASXL3Q9C0F0 2248 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 A0A0B4J269 797 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 JAK2O60674 1132 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 ALDH1A2O94788 518 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 NFATC1O95644 943 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 USP17L7P0C7H9 530 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 ITPKAP23677 461 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 EIF2DP41214 584 aaKnown RBP17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 KIR2DL1P43626 348 aaPredicted RBP17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 GPR15P49685 360 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 NCKAP1LP55160 1127 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 SLC14A1Q13336 389 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 DUOXA1Q1HG43 343 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 WSCD1Q658N2 575 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 JADE1Q6IE81 842 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 SPACA7Q96KW9 195 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 CYP2S1Q96SQ9 504 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 RPF1Q9H9Y2 349 aaKnown RBP17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 ABI2Q9NYB9 513 aaPredicted RBP17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 C2CD2Q9Y426 696 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 PCDHB5Q9Y5E4 795 aa17.52■□□□□ 0.4
CHMP4A-203ENST00000527154 SGK1O00141 431 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 CYB561D2O14569 222 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 OPHN1O60890 802 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 NFICP08651 508 aa17.51■□□□□ 0.39
CHMP4A-203ENST00000527154 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms