RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NRG2O14511 850 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 CCDC192P0DO97 292 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 GJA1P17302 382 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 BDNFP23560 247 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 MAGEA11P43364 429 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 FMO5P49326 533 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 NDST1P52848 882 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 MARSP56192 900 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 ACOT1Q86TX2 421 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 UNC93AQ86WB7 457 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 SCN4BQ8IWT1 228 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 B3GALNT2Q8NCR0 500 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 NXPE3Q969Y0 559 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 TNIP3Q96KP6 325 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 B3GNT5Q9BYG0 378 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 NIF3L1Q9GZT8 377 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 ZNF334Q9HCZ1 680 aaPredicted RBP17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 GDE1Q9NZC3 331 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 DACH1Q9UI36 760 aa17.29■□□□□ 0.36
SSSCA1-202ENST00000526433 ANHXE9PGG2 379 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 PMM2O15305 246 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 ERCC5P28715 1186 aaPredicted RBP17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 TDGQ13569 410 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 HTR4Q13639 388 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 VSTM1Q6UX27 236 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 CREBRFQ8IUR6 639 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 CRYBG2Q8N1P7 616 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 SHKBP1Q8TBC3 707 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 FAXDC2Q96IV6 333 aa17.28■□□□□ 0.36
SSSCA1-202ENST00000526433 PTPRDP23468 1912 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 A0A1W2PRU2 124 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 SLC38A8A6NNN8 435 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 CLDN5O00501 218 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 FGF19O95750 216 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 CSH1P0DML2 217 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 CSH2P0DML3 217 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 HMGA1P17096 107 aaKnown RBP17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 GABRR2P28476 465 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 GRIK1P39086 918 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 INCA1Q0VD86 236 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 ORC1Q13415 861 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 MTMR3Q13615 1198 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 TEAD2Q15562 447 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 CT47A1Q5JQC4 288 aaPredicted RBP17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 GAREM2Q75VX8 874 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 IRF2BP1Q8IU81 584 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 SLC44A3Q8N4M1 653 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 STKLD1Q8NE28 680 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 FGF14Q92915 247 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 ZSWIM3Q96MP5 696 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 RPP25Q9BUL9 199 aaKnown RBP17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 C1QTNF1Q9BXJ1 281 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 ATXN3LQ9H3M9 355 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 HMGXB4Q9UGU5 601 aa17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
SSSCA1-202ENST00000526433 P4HA2O15460 535 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 CD58P19256 250 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 CETN1Q12798 172 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 CCDC183Q5T5S1 534 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 MTSS1LQ765P7 747 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 UBALD2Q8IYN6 164 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 WHAMMQ8TF30 809 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 CNOT6LQ96LI5 555 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 TWNKQ96RR1 684 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 MED10Q9BTT4 135 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 NT5C1AQ9BXI3 368 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 ZNF518BQ9C0D4 1074 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 GPR88Q9GZN0 384 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 MAGED2Q9UNF1 606 aaPredicted RBP17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 TECTAO75443 2155 aa17.26■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM86C2PA6NEL3 165 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 CILPO75339 1184 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 NOL4O94818 638 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 F11P03951 625 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 ANXA13P27216 316 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 LRMPQ12912 555 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 FAM78AQ5JUQ0 283 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 TRIM67Q6ZTA4 783 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 PAQR9Q6ZVX9 377 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 TTC39CQ8N584 583 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 EHBP1Q8NDI1 1231 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 SPATA17Q96L03 361 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 C8orf48Q96LL4 319 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 THAP9Q9H5L6 903 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 C11orf16Q9NQ32 467 aa17.25■□□□□ 0.35
SSSCA1-202ENST00000526433 CISHQ9NSE2 258 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms