RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 TMEM53Q6P2H8 277 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 YTHDF3Q7Z739 585 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 ATP8B4Q8TF62 1192 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 MCEEQ96PE7 176 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 PHF12Q96QT6 1004 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 ASB14A6NK59 587 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 MIF4GDA9UHW6 222 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 POC1B-GALNT4F8VUJ3 575 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 B4GALT5O43286 388 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 DDHD2O94830 711 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 ZNF157P51786 506 aaPredicted RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 FMO1Q01740 532 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 XRCC4Q13426 336 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 MTMR3Q13615 1198 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TDRD10Q5VZ19 366 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 RAVER1Q8IY67 606 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 TMEM130Q8N3G9 435 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 ZBTB8BQ8NAP8 495 aaPredicted RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 HSPH1Q92598 858 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 RMDN2Q96LZ7 410 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 PARK7Q99497 189 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 ZSWIM1Q9BR11 485 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TIPINQ9BVW5 301 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 SLC7A5P2Q9GIP4 190 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 VPS37BQ9H9H4 285 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TUBGCP4Q9UGJ1 667 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 SGK1O00141 431 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 STK10O94804 968 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 MAP3K6O95382 1288 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 RFX1P22670 979 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 PSMD7P51665 324 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 CACNA2D1P54289 1103 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 KRT17Q04695 432 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TFDP1Q14186 410 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 DUOXA2Q1HG44 320 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 ZNF667Q5HYK9 610 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 ABHD15Q6UXT9 468 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 PPFIBP2Q8ND30 876 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 REPS2Q8NFH8 660 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 CXorf38Q8TB03 319 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 GTF3C2Q8WUA4 911 aaPredicted RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 SREK1Q8WXA9 508 aaKnown RBP10.36□□□□□ -0.75
USP35-201ENST00000526425 MOSPD1Q9UJG1 213 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 PCDHB2Q9Y5E7 798 aa10.36□□□□□ -0.75
USP35-201ENST00000526425 A6NHS1 94 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 TRIM64CA6NLI5 447 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 F5H423 210 aaPredicted RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 CXCL8P10145 99 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 HOXD12P35452 270 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 NCKAP1LP55160 1127 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 CUL2Q13617 745 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 SMAD1Q15797 465 aaKnown RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 ATP13A4Q4VNC1 1196 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 TMEM63BQ5T3F8 832 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 TMCO4Q5TGY1 634 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ACAD10Q6JQN1 1059 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 RFX8Q6ZV50 586 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 SCUBE1Q8IWY4 988 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 CYP4X1Q8N118 509 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 LRRC57Q8N9N7 239 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 MAGEC3Q8TD91 643 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ISCUQ9H1K1 167 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 NEUROG2Q9H2A3 272 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 KIAA1586Q9HCI6 787 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 SPATA31C2B4DYI2 1134 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 CFHP08603 1231 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 RALAP11233 206 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 RGS7P49802 495 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 LAMTOR4Q0VGL1 99 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 CAPSQ13938 189 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 LRRC14Q15048 493 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 AMHR2Q16671 573 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 GLRA4Q5JXX5 417 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 GPAT2Q6NUI2 795 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 TMEM214Q6NUQ4 689 aaKnown RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 SLC39A4Q6P5W5 647 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 DTX3LQ8TDB6 740 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ADPGKQ9BRR6 497 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ANAPC5Q9UJX4 755 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ABT1Q9ULW3 272 aaKnown RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 PMS2P54278 862 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 KIF22Q14807 665 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ATF7IP2Q5U623 682 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 OR6B2Q6IFH4 312 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 PDCD7Q8N8D1 485 aaKnown RBP10.35□□□□□ -0.75
USP35-201ENST00000526425 UBA3Q8TBC4 463 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ACTRT1Q8TDG2 376 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 DNAJC9Q8WXX5 260 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 C9orf72Q96LT7 481 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 NUDCD1Q96RS6 583 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 ERP44Q9BS26 406 aa10.35□□□□□ -0.75
USP35-201ENST00000526425 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms