RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 LHX1P48742 406 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 PMS1P54277 932 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 MYL6P60660 151 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 TNNC1P63316 161 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 MYL7Q01449 175 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 SMARCB1Q12824 385 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 NCOA4Q13772 614 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 UBXN2BQ14CS0 331 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 SLC5A9Q2M3M2 681 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 SOWAHAQ2M3V2 549 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 ZACNQ401N2 412 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 SLC39A12Q504Y0 691 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 ANKRD40Q6AI12 368 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 KLHL10Q6JEL2 608 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 ZC3H3Q8IXZ2 948 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 DCP1BQ8IZD4 617 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 TMEM209Q96SK2 561 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 MMS19Q96T76 1030 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 BCO2Q9BYV7 579 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 ZSCAN32Q9NX65 697 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 DDX43Q9NXZ2 648 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 DNMT3BQ9UBC3 853 aaKnown RBP12.25□□□□□ -0.45
CTTN-209ENST00000525276 TSC2P49815 1807 aa12.25□□□□□ -0.45
CTTN-209ENST00000525276 SMG1Q96Q15 3661 aaKnown RBP12.24□□□□□ -0.45
CTTN-209ENST00000525276 BICDL2A1A5D9 508 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 MTMR11A4FU01 709 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 TRIM49BA6NDI0 452 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 GABRDO14764 452 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 SLC16A3O15427 465 aaKnown RBP12.24□□□□□ -0.45
CTTN-209ENST00000525276 CLSTN1O94985 981 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 VNN2O95498 520 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 FAM163BP0C2L3 166 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 TRIM49P0CI25 452 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 TRIM49CP0CI26 452 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 CD44P16070 742 aaKnown RBP12.24□□□□□ -0.45
CTTN-209ENST00000525276 BMP6P22004 513 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 PCSK1P29120 753 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 DUSP4Q13115 394 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 PLD1Q13393 1074 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 ZNF699Q32M78 642 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 WDR72Q3MJ13 1102 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 C1orf220Q5T0J3 134 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 FOXR2Q6PJQ5 311 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 MTSS1LQ765P7 747 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 SV2AQ7L0J3 742 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 LIMS2Q7Z4I7 341 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 OSTM1Q86WC4 334 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 ELMOD1Q8N336 334 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 ATAD1Q8NBU5 361 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 NELFBQ8WX92 580 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 EEF2KMTQ96G04 330 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 ACBD6Q9BR61 282 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 XYLT2Q9H1B5 865 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 BAHCC1Q9P281 2608 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 NCDNQ9UBB6 729 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 HSFX1Q9UBD0 423 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 YIPF1Q9Y548 306 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 ZFYVE26Q68DK2 2539 aa12.24□□□□□ -0.45
CTTN-209ENST00000525276 DSPP15924 2871 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 STX10O60499 249 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 VNN1O95497 513 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 P4HA1P13674 534 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 PTPN2P17706 415 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 WARSP23381 471 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 FCARP24071 287 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 ACAT1P24752 427 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 GTF2H1P32780 548 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 PIK3CAP42336 1068 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 RPS9P46781 194 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 GCLMP48507 274 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 MCCD1P59942 119 aaPredicted RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 PPP3CAQ08209 521 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 TWF1Q12792 350 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 MTAPQ13126 283 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 NFE2Q16621 373 aaPredicted RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 INTS6LQ5JSJ4 861 aaKnown RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 IQCEQ6IPM2 695 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 TPRG1Q6ZUI0 275 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 SPPL2BQ8TCT7 592 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 KBTBD7Q8WVZ9 684 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 TAF4BQ92750 862 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 ZNF512Q96ME7 567 aaPredicted RBP12.23□□□□□ -0.45
CTTN-209ENST00000525276 CEP63Q96MT8 703 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 CRISPLD1Q9H336 500 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 TMEM8AQ9HCN3 771 aa12.23□□□□□ -0.45
CTTN-209ENST00000525276 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms