RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	RRM2B	Q7LG56	351 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PRRT2	Q7Z6L0	340 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	VSIG10L	Q86VR7	867 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ST13P5	Q8NFI4	369 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PYROXD1	Q8WU10	500 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ACAP3	Q96P50	834 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	OSBPL9	Q96SU4	736 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TSEN34	Q9BSV6	310 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	FAM129A	Q9BZQ8	928 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	EML4	Q9HC35	981 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	UBE2T	Q9NPD8	197 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	A1CF	Q9NQ94	594 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SMYD2	Q9NRG4	433 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	DDX28	Q9NUL7	540 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SYBU	Q9NX95	663 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	COL20A1	Q9P218	1284 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	DNAJC12	Q9UKB3	198 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ITGB1BP2	Q9UKP3	347 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TBX20	Q9UMR3	447 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ARL2BP	Q9Y2Y0	163 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	CAB39	Q9Y376	341 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PHIP	Q8WWQ0	1821 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	RNF103-CHMP3	A0A140T963	221 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	GRID2IP	A4D2P6	1211 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	INO80B-WBP1	J3KQ70	363 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SMAP	O00193	183 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	NEMP1	O14524	444 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	GPR182	O15218	404 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	GFPT2	O94808	682 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ANP32D	O95626	131 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ZBED1	O96006	694 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	DLAT	P10515	647 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ITGB5	P18084	799 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	HLA-DPA1	P20036	260 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	DR1	Q01658	176 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PRKCQ	Q04759	706 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	EFTUD2	Q15029	972 aa	Known RBP eCLIP	2.71	□□□□□ -1.98	1e-9	■■■□□ 15.7
PCM1-222	ENST00000524226	MEA1	Q16626	185 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TRIM71	Q2Q1W2	868 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	KLHDC7A	Q5VTJ3	777 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	KAZN	Q674X7	775 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	C4orf50	Q6ZRC1	276 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	EFL1	Q7Z2Z2	1120 aa	Known RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SETD3	Q86TU7	594 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	KSR1	Q8IVT5	923 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	BBS7	Q8IWZ6	715 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SIX6OS1	Q8N1H7	587 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TNIP2	Q8NFZ5	429 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TTC8	Q8TAM2	541 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SLC26A7	Q8TE54	656 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	UCMA	Q8WVF2	138 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SHD	Q96IW2	340 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	BTBD6	Q96KE9	485 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	MED15	Q96RN5	788 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PSMB7	Q99436	277 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	CHP1	Q99653	195 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	MSTO1	Q9BUK6	570 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PITPNM3	Q9BZ71	974 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	ASCC2	Q9H1I8	757 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	C2orf40	Q9H1Z8	148 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	LRRC4	Q9HBW1	653 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TOPORS	Q9NS56	1045 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SELENON	Q9NZV5	590 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PCDHGB4	Q9UN71	923 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SIK3	Q9Y2K2	1263 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	PCDHA2	Q9Y5H9	948 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	HEMK1	Q9Y5R4	338 aa	Predicted RBP	2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	SNCAIP	Q9Y6H5	919 aa		2.71	□□□□□ -1.98
PCM1-222	ENST00000524226	TARSL2	A2RTX5	802 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RRN3P2	A6NIE6	340 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SNTN	A6NMZ2	147 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PSMD3	O43242	534 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CCL5	P13501	91 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	UCHL3	P15374	230 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	NCF2	P19878	526 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	KLRC2	P26717	231 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	PON1	P27169	355 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TCF7	P36402	384 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RARRES1	P49788	294 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	STAT5B	P51692	787 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	NCKAP1L	P55160	1127 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	COPS2	P61201	443 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	EHHADH	Q08426	723 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ILF2	Q12905	390 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TP53BP2	Q13625	1128 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	KIZ	Q2M2Z5	673 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	KIF19	Q2TAC6	998 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	INAVA	Q3KP66	663 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	DNAL1	Q4LDG9	190 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	FBXO46	Q6PJ61	603 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GLB1L	Q6UWU2	654 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	EPM2AIP1	Q7L775	607 aa	Predicted RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZC3H18	Q86VM9	953 aa	Known RBP	2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	TMEM139	Q8IV31	216 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	GLIS3	Q8NEA6	775 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	ZNF555	Q8NEP9	628 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RNF139	Q8WU17	664 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	SEPT1	Q8WYJ6	367 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	CCDC127	Q96BQ5	260 aa		2.7	□□□□□ -1.98
PCM1-222	ENST00000524226	RMDN1	Q96DB5	314 aa		2.7	□□□□□ -1.98

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