RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TRAV19A0A0A6YYK7 116 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 PVALEFA0A1B0GWK0 134 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 MYBPHLA2RUH7 354 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 SPECC1L-ADORA2AF8WAN1 911 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 LRP3O75074 770 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 NOL4O94818 638 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CTHP32929 405 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 MAGEA11P43364 429 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CXCL12P48061 93 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CDR1P51861 262 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 NLRP12P59046 1061 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 ZNF268Q14587 947 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 PSMD6Q15008 389 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 PDGFRLQ15198 375 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 DDR2Q16832 855 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 BMT2Q1RMZ1 405 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 RESP18Q5W5W9 173 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 VSTM1Q6UX27 236 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 EPM2AIP1Q7L775 607 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 MON1AQ86VX9 555 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 SCN4BQ8IWT1 228 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 NELFCDQ8IXH7 590 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 SYNPOQ8N3V7 929 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 SPEM1Q8N4L4 309 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 DCLK2Q8N568 766 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 OR5B17Q8NGF7 314 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CCDC47Q96A33 483 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CCDC127Q96BQ5 260 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 RSPRY1Q96DX4 576 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 TRMT2BQ96GJ1 504 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CEP295NLQ96MC4 621 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 CGRRF1Q99675 332 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 MKNK1Q9BUB5 465 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 BLZF1Q9H2G9 400 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 IL21Q9HBE4 155 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 TRPC7Q9HCX4 862 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 MAGEC2Q9UBF1 373 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 SCN1AP35498 2009 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 NCANO14594 1321 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 TSC2P49815 1807 aa9.49□□□□□ -0.89
CTNNA1-240ENST00000523912 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GABRDO14764 452 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 TRIM66O15016 1216 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 FOXD2O60548 495 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 EXOC3O60645 756 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 PHACTR2O75167 634 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 KIF20AO95235 890 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 MYL1P05976 194 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CKMP06732 381 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 HMGA1P17096 107 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 TRIM21P19474 475 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 WARSP23381 471 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CYP2F1P24903 491 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 AFMP43652 599 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SOX9P48436 509 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GPR15P49685 360 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 AP3M2P53677 418 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 PSMC1P62191 440 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CYP27A1Q02318 531 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CYP24A1Q07973 514 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GRSF1Q12849 480 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 FZD5Q13467 585 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 KCNB1Q14721 858 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 KNOP1Q1ED39 458 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SOWAHAQ2M3V2 549 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SDHAF4Q5VUM1 108 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 TRAPPC11Q7Z392 1133 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 OSTM1Q86WC4 334 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GPIHBP1Q8IV16 184 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 C12orf56Q8IXR9 622 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ZNF687Q8N1G0 1237 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CPA6Q8N4T0 437 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 MAB21L3Q8N8X9 362 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SCFD1Q8WVM8 642 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 MYLPFQ96A32 169 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SYAP1Q96A49 352 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 CCDC34Q96HJ3 373 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ZFYVE19Q96K21 471 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 MYRFLQ96LU7 910 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SLC46A2Q9BY10 475 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SMG9Q9H0W8 520 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 TDP1Q9NUW8 608 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GTSE1Q9NYZ3 720 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 GTF3C4Q9UKN8 822 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 PCDHA7Q9UN72 937 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ATP6V1DQ9Y5K8 247 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 ATP8B3O60423 1300 aa9.48□□□□□ -0.89
CTNNA1-240ENST00000523912 SHISA7A6NL88 538 aa9.47□□□□□ -0.89
CTNNA1-240ENST00000523912 CLIC2O15247 247 aa9.47□□□□□ -0.89
CTNNA1-240ENST00000523912 ATG13O75143 517 aa9.47□□□□□ -0.89
CTNNA1-240ENST00000523912 TACC1O75410 805 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms