RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
SDCBP-211ENST00000523441 TMLHEQ9NVH6 421 aa12.57□□□□□ -0.4
SDCBP-211ENST00000523441 TBX20Q9UMR3 447 aa12.57□□□□□ -0.4
SDCBP-211ENST00000523441 GON4LQ3T8J9 2241 aa12.57□□□□□ -0.4
SDCBP-211ENST00000523441 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 EIF4E1BA6NMX2 242 aaKnown RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 HNRNPLP14866 589 aaKnown RBP eCLIP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 HMGA1P17096 107 aaKnown RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 ITPKAP23677 461 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 RDXP35241 583 aaKnown RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 TIE1P35590 1138 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 KRT79Q5XKE5 535 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 TMEM92Q6UXU6 159 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 C1orf186Q6ZWK4 172 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 ALLCQ8N6M5 410 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 ARL14EPQ8N8R7 260 aaPredicted RBP12.56□□□□□ -0.4
SDCBP-211ENST00000523441 PNPLA1Q8N8W4 532 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 TMEM161BQ8NDZ6 487 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 SPACA7Q96KW9 195 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 CAMK1GQ96NX5 476 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 MYOFQ9NZM1 2061 aa12.56□□□□□ -0.4
SDCBP-211ENST00000523441 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 TRAV19A0A0A6YYK7 116 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 ALDH1A2O94788 518 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 KLF8O95600 359 aaPredicted RBP12.55□□□□□ -0.4
SDCBP-211ENST00000523441 PLS3P13797 630 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 MUTP22033 750 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 ACAT1P24752 427 aaKnown RBP12.55□□□□□ -0.4
SDCBP-211ENST00000523441 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
SDCBP-211ENST00000523441 KDSRQ06136 332 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 SCAPQ12770 1279 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 NR1H3Q13133 447 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 TMEM132DQ14C87 1099 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 CCDC142Q17RM4 750 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 EML3Q32P44 896 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 SPATA1Q5VX52 437 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 LYSMD4Q5XG99 296 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 C11orf74Q86VG3 221 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 TXNDC5Q8NBS9 432 aaKnown RBP12.55□□□□□ -0.4
SDCBP-211ENST00000523441 SPPL2BQ8TCT7 592 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 SH3RF2Q8TEC5 729 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 CNOT6LQ96LI5 555 aaKnown RBP12.55□□□□□ -0.4
SDCBP-211ENST00000523441 FNBP1Q96RU3 617 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 ZHX3Q9H4I2 956 aa12.55□□□□□ -0.4
SDCBP-211ENST00000523441 C2orf78A6NCI8 922 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 K7EQS6 105 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 TADA3O75528 432 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 CYP2F1P24903 491 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 DDX6P26196 483 aaKnown RBP eCLIP12.54□□□□□ -0.4
SDCBP-211ENST00000523441 SLC6A11P48066 632 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 ACOT2P49753 483 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 FAM160A1Q05DH4 1040 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 ZNF77Q15935 545 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 CRY1Q16526 586 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 EMC10Q5UCC4 262 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 SYT12Q8IV01 421 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 DCP1BQ8IZD4 617 aaKnown RBP12.54□□□□□ -0.4
SDCBP-211ENST00000523441 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 LRIG1Q96JA1 1093 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 HSFX1Q9UBD0 423 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 MMP17Q9ULZ9 603 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 NOL7Q9UMY1 257 aaKnown RBP12.54□□□□□ -0.4
SDCBP-211ENST00000523441 GPSM3Q9Y4H4 160 aa12.54□□□□□ -0.4
SDCBP-211ENST00000523441 TCRBV21S2A2A0A5A6 115 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 K7ENM7 598 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 SGK1O00141 431 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 OGTO15294 1046 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 OPHN1O60890 802 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 CSH1P0DML2 217 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 CSH2P0DML3 217 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 OPRD1P41143 372 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 TAF6P49848 677 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 TSPY1Q01534 308 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 GFPT1Q06210 699 aaPredicted RBP12.53□□□□□ -0.4
SDCBP-211ENST00000523441 KCNB1Q14721 858 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 RASSF3Q86WH2 238 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 C4orf32Q8N8J7 132 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 WHAMMQ8TF30 809 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 DPP3Q9NY33 737 aa12.53□□□□□ -0.4
SDCBP-211ENST00000523441 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
SDCBP-211ENST00000523441 EVLQ9UI08 416 aaPredicted RBP12.53□□□□□ -0.4
SDCBP-211ENST00000523441 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms