RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 TDRD10Q5VZ19 366 aaKnown RBP20■□□□□ 0.79
SPIDR-220ENST00000522900 SCN4BQ8IWT1 228 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 YAF2Q8IY57 180 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 ZNF687Q8N1G0 1237 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 BCO2Q9BYV7 579 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 XYLT2Q9H1B5 865 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 NXF1Q9UBU9 619 aaKnown RBP20■□□□□ 0.79
SPIDR-220ENST00000522900 NDRG2Q9UN36 371 aaKnown RBP20■□□□□ 0.79
SPIDR-220ENST00000522900 PIAS3Q9Y6X2 628 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 CACNA1HO95180 2353 aa20■□□□□ 0.79
SPIDR-220ENST00000522900 DPYSL4O14531 572 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 CHADO15335 359 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 PHACTR2O75167 634 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 RHOBTB3O94955 611 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 C4BPAP04003 597 aaKnown RBP19.99■□□□□ 0.79
SPIDR-220ENST00000522900 WEE1P30291 646 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 CLDN10P78369 228 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 TXNDC8Q6A555 127 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 CMTM8Q8IZV2 173 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 MAB21L3Q8N8X9 362 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 OR6B3Q8NGW1 331 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 TTC8Q8TAM2 541 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 TMEM174Q8WUU8 243 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 MYLPFQ96A32 169 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 CLDN23Q96B33 292 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 GCNAQ96QF7 691 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 NELL2Q99435 816 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 SNX25Q9H3E2 840 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 DPEP3Q9H4B8 488 aa19.99■□□□□ 0.79
SPIDR-220ENST00000522900 MAGEC2Q9UBF1 373 aaPredicted RBP19.99■□□□□ 0.79
SPIDR-220ENST00000522900 TACC1O75410 805 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 TADA3O75528 432 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 NOL4O94818 638 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 VNN1O95497 513 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 STAU1O95793 577 aaKnown RBP19.98■□□□□ 0.79
SPIDR-220ENST00000522900 SP9P0CG40 484 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 BDNFP23560 247 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 SOX9P48436 509 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 TNNC1P63316 161 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 BECN1Q14457 450 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 FAM3CQ92520 227 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 FUBP3Q96I24 572 aaKnown RBP eCLIP19.98■□□□□ 0.79
SPIDR-220ENST00000522900 SPATA6Q9NWH7 488 aaPredicted RBP19.98■□□□□ 0.79
SPIDR-220ENST00000522900 OBP2AQ9NY56 170 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 CCL26Q9Y258 94 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 R4GN57 208 aa19.98■□□□□ 0.79
SPIDR-220ENST00000522900 MAN2B1O00754 1011 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 CCNE1P24864 410 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 ATICP31939 592 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 MAGEA11P43364 429 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 CDH8P55286 799 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 CYP27A1Q02318 531 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 BIRC3Q13489 604 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 MDH1BQ5I0G3 518 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 C1orf220Q5T0J3 134 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 CEP135Q66GS9 1140 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 C4orf50Q6ZRC1 276 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 MYCBPAPQ8TBZ2 947 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 BPIFB1Q8TDL5 484 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 CSGALNACT1Q8TDX6 532 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 USP13Q92995 863 aaPredicted RBP19.97■□□□□ 0.79
SPIDR-220ENST00000522900 PCED1BQ96HM7 432 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 MYRFLQ96LU7 910 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 SMYD3Q9H7B4 428 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 TRAF3IP3Q9Y228 551 aa19.97■□□□□ 0.79
SPIDR-220ENST00000522900 MRPS17Q9Y2R5 130 aaKnown RBP19.97■□□□□ 0.79
SPIDR-220ENST00000522900 ZFHX2Q9C0A1 2572 aaPredicted RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 PRR23AA6NEV1 266 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 CALUO43852 315 aaPredicted RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 FAM163BP0C2L3 166 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 PTPN1P18031 435 aaKnown RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 RAP1GAPP47736 663 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 TNK2Q07912 1038 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 NCOA4Q13772 614 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 MON1AQ86VX9 555 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 CELF5Q8N6W0 485 aaKnown RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 RIN3Q8TB24 985 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 SYAP1Q96A49 352 aaPredicted RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 TRMT2BQ96GJ1 504 aaKnown RBP19.96■□□□□ 0.79
SPIDR-220ENST00000522900 CYP2S1Q96SQ9 504 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 SDCBP2Q9H190 292 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 GTSE1Q9NYZ3 720 aa19.96■□□□□ 0.79
SPIDR-220ENST00000522900 USP34Q70CQ2 3546 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 NCAM2O15394 837 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 AVPR1AP37288 418 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 GRIK1P39086 918 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 RPS9P46781 194 aaKnown RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 KPNA1P52294 538 aaPredicted RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 AP3M2P53677 418 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 CACNA2D1P54289 1103 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 USP46P62068 366 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 KCNB1Q14721 858 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 MAPRE1Q15691 268 aaKnown RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 ARHGAP29Q52LW3 1261 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 TXNDC11Q6PKC3 985 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 FMR1NBQ8N0W7 255 aaPredicted RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 TMC2Q8TDI7 906 aa19.95■□□□□ 0.78
SPIDR-220ENST00000522900 MRPS31Q92665 395 aaKnown RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 CCDC47Q96A33 483 aaKnown RBP19.95■□□□□ 0.78
SPIDR-220ENST00000522900 SLC22A12Q96S37 553 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms