RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 RPH3AQ9Y2J0 694 aaPredicted RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PCDHGA2Q9Y5H1 932 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CEPT1Q9Y6K0 416 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 ADGRB3O60242 1522 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 MYH8P13535 1937 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 IFT172Q9UG01 1749 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 TCP11X1B4DZS4 312 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 AGTP01019 485 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 EEF2P13639 858 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 EPB42P16452 691 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 BMP6P22004 513 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 RPS6KB1P23443 525 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 MARCKSP29966 332 aaPredicted RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 ZNF76P36508 570 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 MRPS5P82675 430 aaKnown RBP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 FKBP4Q02790 459 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGB4-204ENST00000522796 FOLH1Q04609 750 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PNOCQ13519 176 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PDK3Q15120 406 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 RFWD3Q6PCD5 774 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 BLOC1S2Q6QNY1 142 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 KDELC1Q6UW63 502 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 STOX1Q6ZVD7 989 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CYB5R4Q7L1T6 521 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PRUNE1Q86TP1 453 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PDSS2Q86YH6 399 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 OR6Y1Q8NGX8 325 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SCFD1Q8WVM8 642 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 HPS1Q92902 700 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CHP1Q99653 195 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CUEDC2Q9H467 287 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 SYTL2Q9HCH5 934 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CYP4F12Q9HCS2 524 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 EHD3Q9NZN3 535 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 PI4KBQ9UBF8 816 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 HPSEQ9Y251 543 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 B3GNT3Q9Y2A9 372 aa8.65□□□□□ -1.02
HMGB4-204ENST00000522796 CRYBG1Q9Y4K1 1723 aa8.65□□□□□ -1.03
HMGB4-204ENST00000522796 AGLP35573 1532 aa8.65□□□□□ -1.03
HMGB4-204ENST00000522796 MYH2Q9UKX2 1941 aa8.65□□□□□ -1.03
HMGB4-204ENST00000522796 SLC12A8A0AV02 714 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 A6NL46 340 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 RAD51BO15315 384 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 DNAJC6O75061 913 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 IFNA14P01570 189 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 KRT5P13647 590 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CYLC1P35663 651 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 S100A12P80511 92 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 OTUD4Q01804 1114 aaKnown RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CDR2Q01850 454 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ATP1A4Q13733 1029 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 KRT81Q14533 505 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ANKRD20A4Q4UJ75 823 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 RANBP10Q6VN20 620 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 FRA10AC1Q70Z53 315 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TAS2R42Q7RTR8 314 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 STRA8Q7Z7C7 330 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ILDR1Q86SU0 546 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 DTX3LQ8TDB6 740 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CAPSLQ8WWF8 208 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 DACT3Q96B18 629 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TAMM41Q96BW9 452 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TNIP3Q96KP6 325 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 MNTQ99583 582 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 WACQ9BTA9 647 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 C9orf16Q9BUW7 83 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 STMN4Q9H169 189 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 SMYD2Q9NRG4 433 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ARHGAP26Q9UNA1 814 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CDC42BPBQ9Y5S2 1711 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 C15orf38-AP3S2A0A0A6YYH1 394 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 F8W8V4 182 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CCRL2O00421 344 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 PLOD2O00469 737 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 BET1O15155 118 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ITM2AO43736 263 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 DNAJB5O75953 348 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TGDSO95455 350 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 GAS8O95995 478 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 FAM228BP0C875 321 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ICAM2P13598 275 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 HSD3B2P26439 372 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 IFNAR2P48551 515 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 SLC9A3P48764 834 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 ADCY7P51828 1080 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 NR1H2P55055 460 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 LAMC2Q13753 1193 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 NFIL3Q16649 462 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 CCNJQ5T5M9 372 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 PDE12Q6L8Q7 609 aaKnown RBP8.64□□□□□ -1.03
HMGB4-204ENST00000522796 NANOGP8Q6NSW7 305 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 TMC5Q6UXY8 1006 aa8.64□□□□□ -1.03
HMGB4-204ENST00000522796 BEND4Q6ZU67 534 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms