RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 ZSCAN16Q9H4T2 348 aaPredicted RBP12.46□□□□□ -0.41
FAM49B-220ENST00000522250 EBF3Q9H4W6 596 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 TMEM206Q9H813 350 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 TDP1Q9NUW8 608 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 INTS13Q9NVM9 706 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 THG1LQ9NWX6 298 aaKnown RBP12.46□□□□□ -0.41
FAM49B-220ENST00000522250 ZMYM5Q9UJ78 669 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 GMEB2Q9UKD1 530 aa12.46□□□□□ -0.41
FAM49B-220ENST00000522250 KIAA1549LQ6ZVL6 1849 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 ATP2C2O75185 946 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 TMEM191BP0C7N4 346 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 ARSAP15289 507 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 MYL7Q01449 175 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 LMNB2Q03252 620 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 RUNX3Q13761 415 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 STK38Q15208 465 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 FSTL4Q6MZW2 842 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 LIMS2Q7Z4I7 341 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 SPATA18Q8TC71 538 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 KBTBD7Q8WVZ9 684 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 MRPS31Q92665 395 aaKnown RBP12.45□□□□□ -0.42
FAM49B-220ENST00000522250 TRMT2BQ96GJ1 504 aaKnown RBP12.45□□□□□ -0.42
FAM49B-220ENST00000522250 MYRFLQ96LU7 910 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 KBTBD4Q9NVX7 518 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 RAB23Q9ULC3 237 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 USP18Q9UMW8 372 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 ATG2BQ96BY7 2078 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 MYO16Q9Y6X6 1858 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 EML5Q05BV3 1969 aa12.45□□□□□ -0.42
FAM49B-220ENST00000522250 K7ELQ4 463 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 ATXN1P54253 815 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 RPL10AP62906 217 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SIM2Q14190 667 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 TMEM196Q5HYL7 178 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 EPM2AIP1Q7L775 607 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 LONP2Q86WA8 852 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SYNPOQ8N3V7 929 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 KIF9Q9HAQ2 790 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 HSPBP1Q9NZL4 362 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 TFIP11Q9UBB9 837 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SPTBN2O15020 2390 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SOBPA7XYQ1 873 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SPTLC2O15270 562 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 LMO2P25791 158 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 PCSK1P29120 753 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 HOXA6P31267 233 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 LHX1P48742 406 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 PSMC1P62191 440 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 ZNF268Q14587 947 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SHC4Q6S5L8 630 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 SPATA2LQ8IUW3 424 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 DHX58Q96C10 678 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.421e-12■■■■□ 26.4
FAM49B-220ENST00000522250 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 ANKRD36BP1Q96IX9 119 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 BACH2Q9BYV9 841 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 FBRSL1Q9HCM7 1045 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 TRPC7Q9HCX4 862 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 CRTAC1Q9NQ79 661 aa12.44□□□□□ -0.42
FAM49B-220ENST00000522250 UXTQ9UBK9 157 aaPredicted RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.44□□□□□ -0.42
FAM49B-220ENST00000522250 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 PRR5-ARHGAP8B1AHC4 643 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
FAM49B-220ENST00000522250 EIF3DO15371 548 aaKnown RBP eCLIP12.43□□□□□ -0.42
FAM49B-220ENST00000522250 TGFB1I1O43294 461 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 PPP6R2O75170 966 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 RETP07949 1114 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 ASIC1P78348 528 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 ARHGAP8P85298 464 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 MYO1EQ12965 1108 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 USP4Q13107 963 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 ZNF77Q15935 545 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 CNNM4Q6P4Q7 775 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 SYT15Q9BQS2 421 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 CUEDC2Q9H467 287 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 POLR3BQ9NW08 1133 aaPredicted RBP12.43□□□□□ -0.42
FAM49B-220ENST00000522250 CDV3Q9UKY7 258 aaKnown RBP12.43□□□□□ -0.42
FAM49B-220ENST00000522250 NME7Q9Y5B8 376 aa12.43□□□□□ -0.42
FAM49B-220ENST00000522250 SPAG17Q6Q759 2223 aa12.42□□□□□ -0.42
FAM49B-220ENST00000522250 C2orf78A6NCI8 922 aa12.42□□□□□ -0.42
FAM49B-220ENST00000522250 EGFP01133 1207 aa12.42□□□□□ -0.42
FAM49B-220ENST00000522250 TNNC2P02585 160 aa12.42□□□□□ -0.42
FAM49B-220ENST00000522250 CASP1P29466 404 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms