RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 CEP68Q76N32 757 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 DPH6Q7L8W6 267 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 LIMS2Q7Z4I7 341 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 ADGRF2Q8IZF7 708 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 SYCP3Q8IZU3 236 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 GPD1LQ8N335 351 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 MAB21L3Q8N8X9 362 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 ZSWIM2Q8NEG5 633 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 CHFRQ96EP1 664 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 INTS4Q96HW7 963 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 ANKRD36BP1Q96IX9 119 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 LOXL4Q96JB6 756 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 CEP295NLQ96MC4 621 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 CBWD1Q9BRT8 395 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 MTMR12Q9C0I1 747 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 PDE11AQ9HCR9 933 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 PANK4Q9NVE7 773 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 TBC1D7Q9P0N9 293 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-229ENST00000521683 A0A087X0B3 334 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 GOLGA8IPA6NC78 632 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 GOLGA8JA6NMD2 632 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 AKAP3O75969 853 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 USP17L7P0C7H9 530 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 TCF3P15923 654 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 DRD1P21728 446 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 ACAT1P24752 427 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CYP2F1P24903 491 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 NASPP49321 788 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CDR1P51861 262 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 MYO1EQ12965 1108 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SRSF5Q13243 272 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 MTF1Q14872 753 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SURF1Q15526 300 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 ZNF77Q15935 545 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 DDR2Q16832 855 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SDHAF4Q5VUM1 108 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 HEATR6Q6AI08 1181 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 TRIM68Q6AZZ1 485 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FSTL4Q6MZW2 842 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CC2D1AQ6P1N0 951 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 PKN3Q6P5Z2 889 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FAM171BQ6P995 826 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 VSTM1Q6UX27 236 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 OSTM1Q86WC4 334 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CCDC65Q8IXS2 484 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CPA6Q8N4T0 437 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CAMKK1Q8N5S9 505 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CSGALNACT2Q8N6G5 542 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 RIN3Q8TB24 985 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 OSCP1Q8WVF1 389 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 GAB3Q8WWW8 586 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 USP28Q96RU2 1077 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 FGFBP2Q9BYJ0 223 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 LRRC27Q9C0I9 530 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 TNMDQ9H2S6 317 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 ZSCAN16Q9H4T2 348 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 EBF3Q9H4W6 596 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 INTS13Q9NVM9 706 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 GTF3C4Q9UKN8 822 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 MAGED2Q9UNF1 606 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 MTMR6Q9Y217 621 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 SNX9Q9Y5X1 595 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
CTNNA1-229ENST00000521683 RALGAPA1Q6GYQ0 2036 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 GREB1Q4ZG55 1949 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 KMT2BQ9UMN6 2715 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 MAP1BP46821 2468 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 TRAV19A0A0A6YYK7 116 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 DCDC2BA2VCK2 349 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 OTOL1A6NHN0 477 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 ZNF233A6NK53 670 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 RNF40O75150 1001 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 EPN2O95208 641 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 TNNC2P02585 160 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 KRT19P08727 400 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 ARSAP15289 507 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 PFKLP17858 780 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 GJA4P35212 333 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 PDE6CP51160 858 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 CEBPZQ03701 1054 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 MAPRE1Q15691 268 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 DUOXA2Q1HG44 320 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 CNNM4Q6P4Q7 775 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 STKLD1Q8NE28 680 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 KBTBD7Q8WVZ9 684 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 ATP2A3Q93084 1043 aa9.53□□□□□ -0.88
CTNNA1-229ENST00000521683 SPATA17Q96L03 361 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms