RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 HNF1BP35680 557 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 MCM2P49736 904 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 HAND2P61296 217 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 CDC42EP1Q00587 391 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 RPL6Q02878 288 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 PSMD2Q13200 908 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 TARBP2Q15633 366 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 NAB2Q15742 525 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 CCDC157Q569K6 752 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 LMBRD2Q68DH5 695 aaPredicted RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 IQCEQ6IPM2 695 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 MIS18BP1Q6P0N0 1132 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 CD300LGQ6UXG3 332 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 ZNF410Q86VK4 478 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 TTC30AQ86WT1 665 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 KRTAP1-3Q8IUG1 177 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 SRRM1Q8IYB3 904 aaKnown RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 CCDC33Q8N5R6 958 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 CNNM3Q8NE01 707 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 TBC1D32Q96NH3 1257 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 ZSCAN10Q96SZ4 725 aaPredicted RBP5.56□□□□□ -1.52
SDC2-206ENST00000521590 SEMA3CQ99985 751 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.56□□□□□ -1.52
SDC2-206ENST00000521590 CYP4F11Q9HBI6 524 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 ASAH2Q9NR71 780 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
SDC2-206ENST00000521590 MYOFQ9NZM1 2061 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ZFC3H1O60293 1989 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 MEIS1O00470 390 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 KLK10O43240 276 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 STAU1O95793 577 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 PCP11498 1178 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 ARSAP15289 507 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 MAOBP27338 520 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ELF1P32519 619 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 KIF5BP33176 963 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 SREBF1P36956 1147 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 PCBP4P57723 403 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 TWF1Q12792 350 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 GRIK3Q13003 919 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 BYSLQ13895 437 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 DOC2BQ14184 412 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 HLA-BQ31612 363 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 TSHZ3Q63HK5 1081 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 GAREM2Q75VX8 874 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 RHPN2Q8IUC4 686 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 DHX40Q8IX18 779 aaKnown RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 SIRT2Q8IXJ6 389 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 TRIML1Q8N9V2 468 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 RIN3Q8TB24 985 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ESR2Q92731 530 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 FRAT1Q92837 279 aaPredicted RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 CD101Q93033 1021 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 CUL5Q93034 780 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ZNF419Q96HQ0 510 aaPredicted RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 HSPA12BQ96MM6 686 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 DPH1Q9BZG8 443 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 FAM124BQ9H5Z6 455 aaPredicted RBP5.55□□□□□ -1.52
SDC2-206ENST00000521590 GPRC5CQ9NQ84 441 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ECHDC1Q9NTX5 307 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ZSWIM5Q9P217 1185 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 GABBR1Q9UBS5 961 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 PCDHA6Q9UN73 950 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 GIT1Q9Y2X7 761 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 PCDHA8Q9Y5H6 950 aa5.55□□□□□ -1.52
SDC2-206ENST00000521590 ABCA2Q9BZC7 2435 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 IGHV1OR15-9A0A0B4J2B8 117 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 CASTOR2A6NHX0 329 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 SGK1O00141 431 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 RAB11FIP3O75154 756 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 ALDH1A2O94788 518 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 AKAP5P24588 427 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 TKTP29401 623 aaKnown RBP5.54□□□□□ -1.52
SDC2-206ENST00000521590 DCTP40126 519 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 MATKP42679 507 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 USP11P51784 963 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 AMPD2Q01433 879 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 ELAVL2Q12926 359 aaKnown RBP5.54□□□□□ -1.52
SDC2-206ENST00000521590 NR1H3Q13133 447 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 TUSC3Q13454 348 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 UBE2SQ16763 222 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 FOXD4L6Q3SYB3 417 aaPredicted RBP5.54□□□□□ -1.52
SDC2-206ENST00000521590 CEP55Q53EZ4 464 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 CCDC178Q5BJE1 867 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 HES3Q5TGS1 186 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 XKR5Q6UX68 686 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 FOXD4L3Q6VB84 417 aaPredicted RBP5.54□□□□□ -1.52
SDC2-206ENST00000521590 SLC36A4Q6YBV0 504 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 IQCA1Q86XH1 822 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 ELMOD1Q8N336 334 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 IL17RCQ8NAC3 791 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 GPATCH3Q96I76 525 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
SDC2-206ENST00000521590 DNAJC25Q9H1X3 360 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 EPN3Q9H201 632 aa5.54□□□□□ -1.52
SDC2-206ENST00000521590 CXCL16Q9H2A7 254 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms