RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 LRRC15Q8TF66 581 aa17.66■□□□□ 0.42
TRAM1-204ENST00000521049 ZNF560Q96MR9 790 aa17.66■□□□□ 0.42
TRAM1-204ENST00000521049 CYP2S1Q96SQ9 504 aa17.66■□□□□ 0.42
TRAM1-204ENST00000521049 TRAV19A0A0A6YYK7 116 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TISP43B9A030 160 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 KHNYNO15037 678 aaKnown RBP17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TBCAO75347 108 aaKnown RBP17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TADA3O75528 432 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TCF3P15923 654 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 CYP2F1P24903 491 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 GBP1P32455 592 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 IFNAR2P48551 515 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 PSMD2Q13200 908 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 SDHAF4Q5VUM1 108 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 UNQ6494/PRO21346Q6UXR6 183 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 ZNF720Q7Z2F6 126 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 EFCAB13Q8IY85 973 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TMEM86AQ8N2M4 240 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 PDCL2Q8N4E4 241 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 KDF1Q8NAX2 398 aaPredicted RBP17.65■□□□□ 0.42
TRAM1-204ENST00000521049 TSTD1Q8NFU3 115 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 RAD54LQ92698 747 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 WASF3Q9UPY6 502 aa17.65■□□□□ 0.42
TRAM1-204ENST00000521049 LNP1A1A4G5 178 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 C1QTNF9BB2RNN3 333 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 GIPC1O14908 333 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 C1QTNF9P0C862 333 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 CEACAM1P13688 526 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 CSRP1P21291 193 aaKnown RBP17.64■□□□□ 0.41
TRAM1-204ENST00000521049 ADSSP30520 456 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 DDIT3P35638 169 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 MYL7Q01449 175 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 INTS6LQ5JSJ4 861 aaKnown RBP17.64■□□□□ 0.41
TRAM1-204ENST00000521049 SH3PXD2AQ5TCZ1 1133 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 PMS2CLQ68D20 193 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 RASSF3Q86WH2 238 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 FSIP1Q8NA03 581 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 SPATA18Q8TC71 538 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 USP33Q8TEY7 942 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 POMGNT1Q8WZA1 660 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 SLC22A12Q96S37 553 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 PKMYT1Q99640 499 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 KIF2CQ99661 725 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 TRPC7Q9HCX4 862 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 DDX43Q9NXZ2 648 aaKnown RBP17.64■□□□□ 0.41
TRAM1-204ENST00000521049 GCNT4Q9P109 453 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 L1RE1Q9UN81 338 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 WNT6Q9Y6F9 365 aa17.64■□□□□ 0.41
TRAM1-204ENST00000521049 HUS1O60921 280 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 CKMP06732 381 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 PLCG1P19174 1290 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 USP4Q13107 963 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 CFAP221Q4G0U5 840 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 STKLD1Q8NE28 680 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 SH3RF2Q8TEC5 729 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 CACTINQ8WUQ7 758 aaKnown RBP17.63■□□□□ 0.41
TRAM1-204ENST00000521049 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 LINC00597Q9H2U6 94 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 TMEM9BQ9NQ34 198 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 GDAP2Q9NXN4 497 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 RALYQ9UKM9 306 aaKnown RBP17.63■□□□□ 0.41
TRAM1-204ENST00000521049 GTF3C4Q9UKN8 822 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 ZMIZ1Q9ULJ6 1067 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 AGAP1Q9UPQ3 857 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 INVSQ9Y283 1065 aa17.63■□□□□ 0.41
TRAM1-204ENST00000521049 KIF26AQ9ULI4 1882 aaPredicted RBP17.63■□□□□ 0.41
TRAM1-204ENST00000521049 K7EQS6 105 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 CDX4O14627 284 aaPredicted RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 NFATC1O95644 943 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 HDCP19113 662 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 LHX1P48742 406 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 TFAMQ00059 246 aaKnown RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 ZNF252P-AS1Q0IIN9 211 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 LRRC52Q8N7C0 313 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 KIAA1958Q8N8K9 716 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 ARL14EPQ8N8R7 260 aaPredicted RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 FUBP3Q96I24 572 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 CNOT6LQ96LI5 555 aaKnown RBP17.62■□□□□ 0.41
TRAM1-204ENST00000521049 STRA6Q9BX79 667 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 ARHGAP26Q9UNA1 814 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 SPAG17Q6Q759 2223 aa17.62■□□□□ 0.41
TRAM1-204ENST00000521049 MYH11P35749 1972 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 TMEM8BA6NDV4 472 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 H3BQV1 296 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 GABRDO14764 452 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 PPP1R37O75864 691 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 ITGB3P05106 788 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 PFKLP17858 780 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 ACAT1P24752 427 aaKnown RBP17.61■□□□□ 0.41
TRAM1-204ENST00000521049 POLR2BP30876 1174 aaKnown RBP17.61■□□□□ 0.41
TRAM1-204ENST00000521049 PDE6CP51160 858 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 FOXC1Q12948 553 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 SPATA2LQ8IUW3 424 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-204ENST00000521049 TOP6BLQ8N6T0 577 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 C1orf127Q8N9H9 656 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 TTC16Q8NEE8 873 aa17.61■□□□□ 0.41
TRAM1-204ENST00000521049 CXorf38Q8TB03 319 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms