RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 EBF1Q9UH73 591 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 WNT6Q9Y6F9 365 aa12.38□□□□□ -0.43
MRPS28-206ENST00000520946 KIF26AQ9ULI4 1882 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 KMT2BQ9UMN6 2715 aaPredicted RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 ZNF638Q14966 1978 aaKnown RBP12.38□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 GIPC1O14908 333 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 IL18RAPO95256 599 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 NFATC1O95644 943 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 PIGRP01833 764 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ADRB2P07550 413 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 KRT19P08727 400 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 CEACAM1P13688 526 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 GPR15P49685 360 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ATXN3P54252 364 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 TFAMQ00059 246 aaKnown RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 LMAN2Q12907 356 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 DDR2Q16832 855 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ARSHQ5FYA8 562 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ARL6IP4Q66PJ3 421 aaKnown RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 LMBRD2Q68DH5 695 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 ANO7Q6IWH7 933 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 SPACA7Q96KW9 195 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 AK8Q96MA6 479 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 NUSAP1Q9BXS6 441 aaKnown RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
MRPS28-206ENST00000520946 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 BCCIPQ9P287 314 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRPS28-206ENST00000520946 CHD8Q9HCK8 2581 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 LNP1A1A4G5 178 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 MYMKA6NI61 221 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 SLC26A4O43511 780 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 HMGA1P17096 107 aaKnown RBP12.36□□□□□ -0.43
MRPS28-206ENST00000520946 HDCP19113 662 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 SPINK2P20155 84 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 CYP2F1P24903 491 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 LPCAT2Q7L5N7 544 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM150AQ86TG1 271 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 NT5DC4Q86YG4 428 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 ARL14EPQ8N8R7 260 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-206ENST00000520946 STKLD1Q8NE28 680 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 SH3RF2Q8TEC5 729 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 CYP2S1Q96SQ9 504 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 ACBD6Q9BR61 282 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 AGAP1Q9UPQ3 857 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
MRPS28-206ENST00000520946 ANKRD63C9JTQ0 380 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 FAM189A1O60320 539 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 ABL1P00519 1130 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 CSRP1P21291 193 aaKnown RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 ANXA13P27216 316 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 PCSK1P29120 753 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 POLR2BP30876 1174 aaKnown RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 GTF2BQ00403 316 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 COL9A2Q14055 689 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 MCM6Q14566 821 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 ZC2HC1CQ53FD0 456 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 PMS2CLQ68D20 193 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 EFCAB13Q8IY85 973 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 TMEM86AQ8N2M4 240 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 CSGALNACT2Q8N6G5 542 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 POLMQ9NP87 494 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-206ENST00000520946 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
MRPS28-206ENST00000520946 NOL4O94818 638 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 ITGB3P05106 788 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 GRIK1P39086 918 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 MAPK8P45983 427 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 LHX1P48742 406 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 IRX4P78413 519 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 POU5F1Q01860 360 aaKnown RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 ZNF77Q15935 545 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 EML3Q32P44 896 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 TRIM61Q5EBN2 209 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 NAIF1Q69YI7 327 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 KIAA1211LQ6NV74 962 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 C4orf50Q6ZRC1 276 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 HDDC3Q8N4P3 179 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 DEFB124Q8NES8 71 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 RAD54LQ92698 747 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 TRMT2BQ96GJ1 504 aaKnown RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 CNOT6LQ96LI5 555 aaKnown RBP12.34□□□□□ -0.43
MRPS28-206ENST00000520946 FAM213AQ9BRX8 229 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 SCNM1Q9BWG6 230 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 LINC00597Q9H2U6 94 aa12.34□□□□□ -0.43
MRPS28-206ENST00000520946 MRPL44Q9H9J2 332 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms