RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 PTK2BQ14289 1009 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 SLC9C1Q4G0N8 1177 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 PXDC1Q5TGL8 231 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 IDO2Q6ZQW0 420 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 TICAM1Q8IUC6 712 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NLRP7Q8WX94 980 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 WASF1Q92558 559 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 HSPH1Q92598 858 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 ZUFSPQ96AP4 578 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 CCDC77Q9BR77 488 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 TRIT1Q9H3H1 467 aaKnown RBP13.38□□□□□ -0.27
CPEB4-208ENST00000520867 SP140LQ9H930 580 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 CDH7Q9ULB5 785 aa13.38□□□□□ -0.27
CPEB4-208ENST00000520867 PSMA7O14818 248 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 POLR1CO15160 346 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 CAPN1P07384 714 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PRDX6P30041 224 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 SLC26A3P40879 764 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PTPN5P54829 565 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 NLRP6P59044 892 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PHC1P78364 1004 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 HP1BP3Q5SSJ5 553 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 AGAP7PQ5VUJ5 663 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 UBE2UQ5VVX9 321 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 FAM122CQ6P4D5 195 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 RRAGAQ7L523 313 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 ZSCAN29Q8IWY8 852 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 TUBB6Q9BUF5 446 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 FARSBQ9NSD9 589 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 GRHL1Q9NZI5 618 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PADI4Q9UM07 663 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PTPN9P43378 593 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 TFAP4Q01664 338 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 TAGLNQ01995 201 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 LRRC63Q05C16 580 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 MIIPQ5JXC2 388 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 KCTD20Q7Z5Y7 419 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 GPR180Q86V85 440 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 CCDC28AQ8IWP9 274 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 CHCHD4Q8N4Q1 142 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 THAP11Q96EK4 314 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 FERMT1Q9BQL6 677 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 RIOK1Q9BRS2 568 aaKnown RBP13.37□□□□□ -0.27
CPEB4-208ENST00000520867 MROQ9BYG7 248 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 CPQQ9Y646 472 aa13.37□□□□□ -0.27
CPEB4-208ENST00000520867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 TAF4O00268 1085 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 HDAC3O15379 428 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 RPA1P27694 616 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 HAND2P61296 217 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 ULK2Q8IYT8 1036 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 TTLQ8NG68 377 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CDKL2Q92772 493 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 GLG1Q92896 1179 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CNBD2Q96M20 576 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 MTMR9Q96QG7 549 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 PYM1Q9BRP8 204 aaKnown RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 PDGFDQ9GZP0 370 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 MOV10Q9HCE1 1003 aaKnown RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 NPHS2Q9NP85 383 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 ZNF277Q9NRM2 450 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 FAM207AQ9NSI2 230 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CFAP99D6REC4 459 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 TK2O00142 265 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 KPNA4O00629 521 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 TM7SF2O76062 418 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 RHOBTB3O94955 611 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 SRGAP2CP0DJJ0 459 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CALM1P0DP23 149 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CALM2P0DP24 149 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CALM3P0DP25 149 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 CPA2P48052 419 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
CPEB4-208ENST00000520867 TRIP10Q15642 601 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 NTRK3Q16288 839 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 OTOAQ7RTW8 1153 aa13.36□□□□□ -0.27
CPEB4-208ENST00000520867 SLC15A4Q8N697 577 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms