RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 KCNK12Q9HB15 430 aa17.36■□□□□ 0.37
TNPO1-212ENST00000520850 MYO10Q9HD67 2058 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 GPR37L1O60883 481 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 MOSPD3O75425 235 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 PTMSP20962 102 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 CYP2F1P24903 491 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 ZXDAP98168 799 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 KCNH2Q12809 1159 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 CCDC183Q5T5S1 534 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 SPOPLQ6IQ16 392 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 MTSS1LQ765P7 747 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 GET4Q7L5D6 327 aaPredicted RBP17.35■□□□□ 0.37
TNPO1-212ENST00000520850 IRF2BP1Q8IU81 584 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 C8orf48Q96LL4 319 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 ELOVL4Q9GZR5 314 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 MMRN2Q9H8L6 949 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 TRPV4Q9HBA0 871 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 EHD2Q9NZN4 543 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 UXTQ9UBK9 157 aaPredicted RBP17.35■□□□□ 0.37
TNPO1-212ENST00000520850 MUTYHQ9UIF7 546 aa17.35■□□□□ 0.37
TNPO1-212ENST00000520850 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNPO1-212ENST00000520850 TRIM66O15016 1216 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 HCRTO43612 131 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 CILPO75339 1184 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 NOL4O94818 638 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
TNPO1-212ENST00000520850 HMGA1P17096 107 aaKnown RBP17.34■□□□□ 0.37
TNPO1-212ENST00000520850 CDC25CP30307 473 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 CCR2P41597 374 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
TNPO1-212ENST00000520850 TDGQ13569 410 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 MTMR3Q13615 1198 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 FAM114A1Q8IWE2 563 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 HS6ST3Q8IZP7 471 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 LMO3Q8TAP4 145 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
TNPO1-212ENST00000520850 MYLPFQ96A32 169 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 NT5C1AQ9BXI3 368 aa17.34■□□□□ 0.37
TNPO1-212ENST00000520850 ATP8B3O60423 1300 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 LRRN2O75325 713 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 TBXAS1P24557 533 aaPredicted RBP17.33■□□□□ 0.36
TNPO1-212ENST00000520850 DDX6P26196 483 aaKnown RBP eCLIP17.33■□□□□ 0.36
TNPO1-212ENST00000520850 NDST1P52848 882 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 HTR4Q13639 388 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 TAF12Q16514 161 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 MDH1BQ5I0G3 518 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 GAREM2Q75VX8 874 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 EHBP1Q8NDI1 1231 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 FAM200AQ8TCP9 573 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 JAKMIP2Q96AA8 810 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 E2F7Q96AV8 911 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 B3GNT5Q9BYG0 378 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 DPEP3Q9H4B8 488 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 EPHX3Q9H6B9 360 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 IL21Q9HBE4 155 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 ANO10Q9NW15 660 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 COMMD8Q9NX08 183 aa17.33■□□□□ 0.36
TNPO1-212ENST00000520850 PTPRDP23468 1912 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 GTPBP10A4D1E9 387 aaKnown RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 ECI2O75521 394 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SOAT2O75908 522 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 F11P03951 625 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 MYL4P12829 197 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SP100P23497 879 aaPredicted RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 BDNFP23560 247 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 RAP1GAPP47736 663 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 PPP3CCP48454 512 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 YWHAEP62258 255 aaKnown RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 CYP27A1Q02318 531 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SIGLEC14Q08ET2 396 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 PAQR9Q6ZVX9 377 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 BMP8AQ7Z5Y6 402 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SLC44A3Q8N4M1 653 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SHKBP1Q8TBC3 707 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 WHAMMQ8TF30 809 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 TATDN2Q93075 761 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 TCEAL4Q96EI5 215 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 CNOT6LQ96LI5 555 aaKnown RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 HNRNPABQ99729 332 aaKnown RBP17.32■□□□□ 0.36
TNPO1-212ENST00000520850 LPIN3Q9BQK8 851 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 TTLL2Q9BWV7 592 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 CSNK1G1Q9HCP0 422 aa17.32■□□□□ 0.36
TNPO1-212ENST00000520850 SLC38A8A6NNN8 435 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 CEBPBP17676 345 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 PFKLP17858 780 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 GABRR2P28476 465 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 GRIK1P39086 918 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 GCNT1Q02742 428 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 CUL2Q13617 745 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 DDR2Q16832 855 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 POTEHQ6S545 545 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 SCARA5Q6ZMJ2 495 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 DENND5BQ6ZUT9 1274 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
TNPO1-212ENST00000520850 FUKQ8N0W3 1084 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms