RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 ZNF362Q5T0B9 420 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DENND5BQ6ZUT9 1274 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DAGLBQ8NCG7 672 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 MMP19Q99542 508 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 E5RJQ4 531 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 GRIA2P42262 883 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 SCNN1DP51172 638 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 ZNF200P98182 395 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 WASHC5Q12768 1159 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 MOGSQ13724 837 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 GK3PQ14409 553 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 R3HDM1Q15032 1099 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 SMTNL2Q2TAL5 461 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CCDC153Q494R4 210 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 FAXCQ5TGI0 409 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 C3orf62Q6ZUJ4 267 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 CYFIP1Q7L576 1253 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DPH6Q7L8W6 267 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 POLNQ7Z5Q5 900 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 TREML1Q86YW5 311 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 PRPF18Q99633 342 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 JMJD4Q9H9V9 463 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 DNPEPQ9ULA0 475 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 SATB2Q9UPW6 733 aa10.57□□□□□ -0.72
PDGFRB-207ENST00000520579 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 HSPA6P17066 643 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TKTP29401 623 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 RPS8P62241 208 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PDK4Q16654 411 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PPM1NQ8N819 430 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 WNT8AQ9H1J5 351 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TUT1Q9H6E5 874 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 HACD3Q9P035 362 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 KANSL3Q9P2N6 904 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 MAGED2Q9UNF1 606 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PDXKO00764 312 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 ZNF862O60290 1169 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TCF7P36402 384 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 EIF2B2P49770 351 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 SLC12A3P55017 1021 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 AQP5P55064 265 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 BFSP1Q12934 665 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TTLL12Q14166 644 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 ENDOVQ8N8Q3 282 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 VPS37AQ8NEZ2 397 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 GDPD5Q8WTR4 605 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 DCLK3Q9C098 648 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PCDHGB4Q9UN71 923 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PCDHGB5Q9Y5G0 923 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 COL1A1P02452 1464 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 DCAF8L1A6NGE4 600 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 BTNL10A8MVZ5 291 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PRR5-ARHGAP8B1AHC4 643 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 ZWINTO95229 277 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 C6orf222P0C671 652 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TCF4P15884 667 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 CRKLP46109 303 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 DRG2P55039 364 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TUBA1BP68363 451 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 ARHGAP8P85298 464 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 HSP90AA5PQ58FG0 334 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 BSPRYQ5W0U4 402 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TUBA1AQ71U36 451 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 GATA6Q92908 595 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 ANKRD27Q96NW4 1050 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PANX3Q96QZ0 392 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 CSRNP1Q96S65 589 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 PCDHA3Q9Y5H8 950 aa10.56□□□□□ -0.72
PDGFRB-207ENST00000520579 KRT1P04264 644 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 MXI1P50539 228 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 CDK7P50613 346 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 PDK1Q15118 436 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ARHGAP24Q8N264 748 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 CIDEBQ9UHD4 219 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 I3L4J1 428 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 AP3B1O00203 1094 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ATP2A1O14983 1001 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 CCNG1P51959 295 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 NPEPPSP55786 919 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 TAS2R40P59535 323 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 SLC45A4Q5BKX6 768 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ULK2Q8IYT8 1036 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ZNF34Q8IZ26 560 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 CCDC89Q8N998 374 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 C7orf57Q8NEG2 295 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 OXNAD1Q96HP4 312 aaPredicted RBP10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 OSBPL8Q9BZF1 889 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 ANKRD2Q9GZV1 360 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
PDGFRB-207ENST00000520579 AGPAT3Q9NRZ7 376 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms