RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 RUNX3Q13761 415 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 CCINQ13939 588 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 SOWAHAQ2M3V2 549 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 HEATR6Q6AI08 1181 aaKnown RBP16.27■□□□□ 0.2
CSMD1-207ENST00000520451 TRIM68Q6AZZ1 485 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 LAIR1Q6GTX8 287 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 MON1AQ86VX9 555 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 SYNPOQ8N3V7 929 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 DHX58Q96C10 678 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 HPDLQ96IR7 371 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 TRIM9Q9C026 710 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 CUEDC2Q9H467 287 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 EBF3Q9H4W6 596 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 TRPC7Q9HCX4 862 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 HPS4Q9NQG7 708 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 C2orf42Q9NWW7 574 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 HSPBP1Q9NZL4 362 aa16.27■□□□□ 0.2
CSMD1-207ENST00000520451 SOBPA7XYQ1 873 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 EIF3DO15371 548 aaKnown RBP eCLIP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 PPP6R2O75170 966 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 TADA3O75528 432 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 HOXD13P35453 343 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 AMPD3Q01432 767 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 LMNB2Q03252 620 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 SRSF5Q13243 272 aaKnown RBP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 SIM2Q14190 667 aaPredicted RBP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 SURF1Q15526 300 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 DUOXA2Q1HG44 320 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 CFAP221Q4G0U5 840 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 LONP2Q86WA8 852 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 FUBP3Q96I24 572 aaKnown RBP eCLIP16.26■□□□□ 0.19
CSMD1-207ENST00000520451 SYT15Q9BQS2 421 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 PARD6AQ9NPB6 346 aa16.26■□□□□ 0.19
CSMD1-207ENST00000520451 KIF26AQ9ULI4 1882 aaPredicted RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 OTOL1A6NHN0 477 aaPredicted RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 HRO43593 1189 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 CUTAO60888 179 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 ATP2C2O75185 946 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 YEATS4O95619 227 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 ARSAP15289 507 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 TGM1P22735 817 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 PSMC1P62191 440 aaKnown RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 GRSF1Q12849 480 aaKnown RBP eCLIP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 FAM26FQ5R3K3 315 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 FOXD4L5Q5VV16 416 aaPredicted RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 C4orf50Q6ZRC1 276 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 DPH6Q7L8W6 267 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 IQUBQ8NA54 791 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 KBTBD7Q8WVZ9 684 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 FOXD4L4Q8WXT5 416 aaPredicted RBP16.25■□□□□ 0.19
CSMD1-207ENST00000520451 MYRFLQ96LU7 910 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
CSMD1-207ENST00000520451 TRAV19A0A0A6YYK7 116 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 CKMP06732 381 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 RETP07949 1114 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 DLATP10515 647 aaKnown RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 SDHBP21912 280 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 LMO2P25791 158 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 HOXC13P31276 330 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 CNR2P34972 360 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 MAGEA11P43364 429 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 SPEM2Q0P670 501 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 MTF1Q14872 753 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 PDGFRLQ15198 375 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 FOXD4L6Q3SYB3 417 aaPredicted RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 TMEM196Q5HYL7 178 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 FSTL4Q6MZW2 842 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 FOXD4L3Q6VB84 417 aaPredicted RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 EPM2AIP1Q7L775 607 aaPredicted RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 LIMS2Q7Z4I7 341 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 WDR49Q8IV35 697 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 MYLPFQ96A32 169 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 MMS19Q96T76 1030 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 AGPAT3Q9NRZ7 376 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 CDV3Q9UKY7 258 aaKnown RBP16.24■□□□□ 0.19
CSMD1-207ENST00000520451 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
CSMD1-207ENST00000520451 NCOR2Q9Y618 2525 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 OBSL1O75147 1896 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 TRDMT1O14717 391 aaKnown RBP16.23■□□□□ 0.19
CSMD1-207ENST00000520451 PDGFRBP09619 1106 aa16.23■□□□□ 0.19
CSMD1-207ENST00000520451 USP17L7P0C7H9 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms