RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 DENND3A2RUS2 1198 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 SNX2O60749 519 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 ADRA1DP25100 572 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 SOX11P35716 441 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 CCNG2Q16589 344 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 ANO4Q32M45 955 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 LUZP2Q86TE4 346 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 FBXL16Q8N461 479 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 DIS3LQ8TF46 1054 aaKnown RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 NRDE2Q9H7Z3 1164 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 TRPC7Q9HCX4 862 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 EXOSC4Q9NPD3 245 aaKnown RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 CLTCL1P53675 1640 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 CAMTA2O94983 1202 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 RBP3P10745 1247 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 UQCRBP14927 111 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 KCNQ4P56696 695 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 TFDP1Q14186 410 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 SLC26A11Q86WA9 606 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 DRAXINQ8NBI3 349 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 SKA2Q8WVK7 121 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 USP13Q92995 863 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 BORCS5Q969J3 196 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 MCEEQ96PE7 176 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 COPS7BQ9H9Q2 264 aaPredicted RBP12.71□□□□□ -0.38
SHPRH-207ENST00000519632 DCDC2Q9UHG0 476 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 V9GYQ6 96 aa12.71□□□□□ -0.38
SHPRH-207ENST00000519632 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 GRK2P25098 689 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 RPA3P35244 121 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 FAM71DQ8N9W8 422 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 RIN3Q8TB24 985 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 PGBD4Q96DM1 585 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 DEPDC7Q96QD5 511 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 EPB41L4AQ9HCS5 686 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 FOLH1Q04609 750 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ZC3H12BQ5HYM0 836 aaKnown RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 USP33Q8TEY7 942 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 APOPT1Q96IL0 206 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 A0A087X0B3 334 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 PROCP04070 461 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 IMPDH2P12268 514 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 FAM102AQ5T9C2 384 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 CDC26Q8NHZ8 85 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 DIABLOQ9NR28 239 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 WDR37Q9Y2I8 494 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 MATN2O00339 956 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 TRIM24O15164 1050 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 CLOCKO15516 846 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 CNOT3O75175 753 aaKnown RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ARPC4P59998 168 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 USP10Q14694 798 aaKnown RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 NTRK3Q16288 839 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 MTERF2Q49AM1 385 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ARMCX4Q5H9R4 360 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 AAGABQ6PD74 315 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 WNK4Q96J92 1243 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 NSMCE4AQ9NXX6 385 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 SLC5A4Q9NY91 659 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
SHPRH-207ENST00000519632 COPG1Q9Y678 874 aaKnown RBP12.7□□□□□ -0.38
SHPRH-207ENST00000519632 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 FOXN3O00409 490 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 XPOTO43592 962 aaKnown RBP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 GRB10Q13322 594 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 TAF12Q16514 161 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 PDK4Q16654 411 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 SH3RF1Q7Z6J0 888 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 P3H2Q8IVL5 708 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 GPD1LQ8N335 351 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 EPAS1Q99814 870 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 CEP44Q9C0F1 390 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 ATP9BO43861 1147 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 H2AFYO75367 372 aaKnown RBP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 OATP04181 439 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 P4HBP07237 508 aaKnown RBP12.69□□□□□ -0.38
SHPRH-207ENST00000519632 SOX6P35712 828 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 PBX1P40424 430 aa12.69□□□□□ -0.38
SHPRH-207ENST00000519632 SCNN1DP51172 638 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms