RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
TRAPPC9-206ENST00000519482 DDX43Q9NXZ2 648 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-206ENST00000519482 HPSEQ9Y251 543 aa13.36□□□□□ -0.27
TRAPPC9-206ENST00000519482 R3HCC1Q9Y3T6 440 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-206ENST00000519482 PTPRDP23468 1912 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 A0A1B0GVL5 298 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 MYBPHLA2RUH7 354 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 LILRB5O75023 590 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 TNNC2P02585 160 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 F11P03951 625 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 CHRNB1P11230 501 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 PCSK1P29120 753 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 SYKP43405 635 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 KPNA1P52294 538 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 NRLP54845 237 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 SNRPFP62306 86 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 RPL10AP62906 217 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 ASIC1P78348 528 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 CYP4F8P98187 520 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 FOXK2Q01167 660 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 LRRC32Q14392 662 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 STX1AQ16623 288 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 DUOXA2Q1HG44 320 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 EPM2AIP1Q7L775 607 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 RALGPS2Q86X27 583 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 CMTM8Q8IZV2 173 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 GLIS3Q8NEA6 775 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 HPS3Q969F9 1004 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 LRRC3BQ96PB8 259 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 PI4K2AQ9BTU6 479 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 SLC46A2Q9BY10 475 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 THG1LQ9NWX6 298 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 HSPBP1Q9NZL4 362 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 SIX4Q9UIU6 781 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 SNX9Q9Y5X1 595 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 UBE4BO95155 1302 aa13.35□□□□□ -0.27
TRAPPC9-206ENST00000519482 FRYLO94915 3013 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 GABRDO14764 452 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 PRAMEF12O95522 483 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 TPM3P06753 285 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 HOXD13P35453 343 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 AVPR1AP37288 418 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 ID4P47928 161 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 CCR3P51677 355 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 CDR1P51861 262 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 NLRP12P59046 1061 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 SOWAHAQ2M3V2 549 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 LIMS2Q7Z4I7 341 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 TMEM150AQ86TG1 271 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 ADGRF2Q8IZF7 708 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 FUBP3Q96I24 572 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 GTF3C4Q9UKN8 822 aa13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 HELZP42694 1942 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-206ENST00000519482 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 TDGF1P13385 188 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 PFKFB1P16118 471 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 CYP2F1P24903 491 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 CTHP32929 405 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 ZNF165P49910 485 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 EHHADHQ08426 723 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 SNRNP35Q16560 246 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 LMBRD2Q68DH5 695 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 TSSK4Q6SA08 328 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 OSTM1Q86WC4 334 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 SPATA2LQ8IUW3 424 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 MRPS31Q92665 395 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 HPDLQ96IR7 371 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 MYRFLQ96LU7 910 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 EPC1Q9H2F5 836 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 AGPAT3Q9NRZ7 376 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 PTPRJQ12913 1337 aa13.33□□□□□ -0.28
TRAPPC9-206ENST00000519482 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms