RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 PARD3BQ8TEW8 1205 aa22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 MYRFLQ96LU7 910 aa22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 SYT15Q9BQS2 421 aa22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 MRPL45Q9BRJ2 306 aaKnown RBP22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 GOLPH3LQ9H4A5 285 aa22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 MRPS17Q9Y2R5 130 aaKnown RBP22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 TCHHQ07283 1943 aa22.74■■□□□ 1.23
ARFGEF1-206ENST00000519436 PRR23AA6NEV1 266 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 SOBPA7XYQ1 873 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 PDGFRBP09619 1106 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 SP9P0CG40 484 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 MAGEA9P43362 315 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 MAGEA11P43364 429 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 RPS9P46781 194 aaKnown RBP22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 MYL6P60660 151 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 DPYDQ12882 1025 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 SPATA2LQ8IUW3 424 aaPredicted RBP22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 CMTM8Q8IZV2 173 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 MMS19Q96T76 1030 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 ZMYM5Q9UJ78 669 aa22.73■■□□□ 1.23
ARFGEF1-206ENST00000519436 SLC38A8A6NNN8 435 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 LRRIQ3A6PVS8 624 aaPredicted RBP22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 TADA3O75528 432 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 RHOBTB3O94955 611 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 C4BPAP04003 597 aaKnown RBP22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 PSMC1P62191 440 aaKnown RBP22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 WDR72Q3MJ13 1102 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 KRBA2Q6ZNG9 492 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 FSIP1Q8NA03 581 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 TRMT2BQ96GJ1 504 aaKnown RBP22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 GCNAQ96QF7 691 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 SMG9Q9H0W8 520 aaKnown RBP22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 VRTNQ9H8Y1 702 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 GDPD2Q9HCC8 539 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 PIAS3Q9Y6X2 628 aa22.72■■□□□ 1.23
ARFGEF1-206ENST00000519436 NCAM2O15394 837 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 ZNF202O95125 648 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 DDX6P26196 483 aaKnown RBP eCLIP22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 ATICP31939 592 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 GNL1P36915 607 aaPredicted RBP22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 ARHGAP29Q52LW3 1261 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 TDRD10Q5VZ19 366 aaKnown RBP22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 MON1AQ86VX9 555 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 YAF2Q8IY57 180 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 MYCBPAPQ8TBZ2 947 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 BPIFB1Q8TDL5 484 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 FAM3CQ92520 227 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 NKD2Q969F2 451 aaPredicted RBP22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 MYLPFQ96A32 169 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 ZFYVE19Q96K21 471 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 MAGED2Q9UNF1 606 aaPredicted RBP22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 TRAF3IP3Q9Y228 551 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 COL4A2P08572 1712 aa22.71■■□□□ 1.23
ARFGEF1-206ENST00000519436 DPYSL4O14531 572 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 NR3C1P04150 777 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 AP3M2P53677 418 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 TRPC3Q13507 836 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 MAPRE1Q15691 268 aaKnown RBP22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 TXNDC8Q6A555 127 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 VSTM1Q6UX27 236 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 MAMSTRQ6ZN01 415 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 C4orf50Q6ZRC1 276 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 CELF5Q8N6W0 485 aaKnown RBP22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 MAB21L3Q8N8X9 362 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 USP13Q92995 863 aaPredicted RBP22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 PCED1BQ96HM7 432 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 SPATA6Q9NWH7 488 aaPredicted RBP22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 MAGEC2Q9UBF1 373 aaPredicted RBP22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 CCL26Q9Y258 94 aa22.7■■□□□ 1.22
ARFGEF1-206ENST00000519436 VNN1O95497 513 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 BDNFP23560 247 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 CCNE1P24864 410 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 DLG4P78352 724 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 ZNF528Q3MIS6 628 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 C1orf220Q5T0J3 134 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 SCN4BQ8IWT1 228 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 RIN3Q8TB24 985 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 SYAP1Q96A49 352 aaPredicted RBP22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 SPATA17Q96L03 361 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 FAM83CQ9BQN1 747 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 SNX25Q9H3E2 840 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 C8orf33Q9H7E9 229 aaPredicted RBP22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 GTSE1Q9NYZ3 720 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 UXTQ9UBK9 157 aaPredicted RBP22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 FBXO4Q9UKT5 387 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 NDRG2Q9UN36 371 aaKnown RBP22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 R4GN57 208 aa22.69■■□□□ 1.22
ARFGEF1-206ENST00000519436 FAM186AA6NE01 2351 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 CHRNB1P11230 501 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 PTPN1P18031 435 aaKnown RBP22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 SOX9P48436 509 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 TNNC1P63316 161 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 KCNB1Q14721 858 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 NFIL3Q16649 462 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 WDR44Q5JSH3 913 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 OR6B3Q8NGW1 331 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 TMC2Q8TDI7 906 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 CSGALNACT1Q8TDX6 532 aa22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 MRPS31Q92665 395 aaKnown RBP22.68■■□□□ 1.22
ARFGEF1-206ENST00000519436 NELL1Q92832 810 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms