RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TAF12Q16514 161 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 PABPC1LQ4VXU2 614 aaKnown RBP24.04■■□□□ 1.44
SKP1-206ENST00000519321 SMYD5Q6GMV2 418 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 TRIM65Q6PJ69 517 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 ENOSF1Q7L5Y1 443 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 DHX40Q8IX18 779 aaKnown RBP24.04■■□□□ 1.44
SKP1-206ENST00000519321 TTC9BQ8N6N2 239 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 JAKMIP2Q96AA8 810 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 ARID3AQ99856 593 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 CRACR2AQ9BSW2 395 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 TAB2Q9NYJ8 693 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 CEP72Q9P209 647 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 DNMT3BQ9UBC3 853 aaKnown RBP24.04■■□□□ 1.44
SKP1-206ENST00000519321 HMGXB4Q9UGU5 601 aa24.04■■□□□ 1.44
SKP1-206ENST00000519321 LIMA1Q9UHB6 759 aaKnown RBP24.04■■□□□ 1.44
SKP1-206ENST00000519321 TRIM66O15016 1216 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 CCDC142Q17RM4 750 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 FKBP15Q5T1M5 1219 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 CYP4A22Q5TCH4 519 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 OTOP3Q7RTS5 596 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 WHAMMQ8TF30 809 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 PSMG2Q969U7 264 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 ACSF2Q96CM8 615 aaPredicted RBP24.03■■□□□ 1.44
SKP1-206ENST00000519321 ASAH2Q9NR71 780 aa24.03■■□□□ 1.44
SKP1-206ENST00000519321 ZNF197O14709 1029 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 FGF19O95750 216 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 RHOP08100 348 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 ATF6P18850 670 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 BDNFP23560 247 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 FSHRP23945 695 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 PON1P27169 355 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 ANXA13P27216 316 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 GRIK1P39086 918 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 SCN4BQ8IWT1 228 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 ADAMTS19Q8TE59 1207 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 TMEM176AQ96HP8 235 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 TWNKQ96RR1 684 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 CORO1BQ9BR76 489 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 MED10Q9BTT4 135 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 B3GNT5Q9BYG0 378 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 VPS16Q9H269 839 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.02■■□□□ 1.44
SKP1-206ENST00000519321 APEX2Q9UBZ4 518 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 XIRP2A4UGR9 3374 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 DENND4AQ7Z401 1863 aa24.02■■□□□ 1.44
SKP1-206ENST00000519321 LRRC10BA6NIK2 292 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 SOAT2O75908 522 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 CSH1P0DML2 217 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 CSH2P0DML3 217 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 SLC9A1P19634 815 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 CDR1P51861 262 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 COPB1P53618 953 aaKnown RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 EPHA5P54756 1037 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 MFAP3P55082 362 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 ZP2Q05996 745 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 ORC1Q13415 861 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 IQCB1Q15051 598 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 ZNF394Q53GI3 561 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 PHLDB3Q6NSJ2 640 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 PDZD4Q76G19 769 aaPredicted RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 RRAGAQ7L523 313 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 DNAJB7Q7Z6W7 309 aaPredicted RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 ARHGEF19Q8IW93 802 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 PLCD3Q8N3E9 789 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 UBR7Q8N806 425 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 FEZF2Q8TBJ5 459 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 SMARCD1Q96GM5 515 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 RPGRIP1Q96KN7 1286 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 C8orf48Q96LL4 319 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 HEXIM2Q96MH2 286 aaKnown RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 HSD3B7Q9H2F3 369 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 UBE2TQ9NPD8 197 aaPredicted RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 HCFC1R1Q9NWW0 138 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 KIAA1257Q9ULG3 409 aa24.01■■□□□ 1.43
SKP1-206ENST00000519321 ZFP37Q9Y6Q3 630 aaPredicted RBP24.01■■□□□ 1.43
SKP1-206ENST00000519321 TCF20Q9UGU0 1960 aaKnown RBP24■■□□□ 1.43
SKP1-206ENST00000519321 MICAL2O94851 1124 aa24■■□□□ 1.43
SKP1-206ENST00000519321 RAD23BP54727 409 aa24■■□□□ 1.43
SKP1-206ENST00000519321 FAM35AQ86V20 835 aa24■■□□□ 1.43
SKP1-206ENST00000519321 TDRD5Q8NAT2 981 aaKnown RBP24■■□□□ 1.43
SKP1-206ENST00000519321 SLC4A11Q8NBS3 891 aa24■■□□□ 1.43
SKP1-206ENST00000519321 CYFIP2Q96F07 1278 aa24■■□□□ 1.43
SKP1-206ENST00000519321 SPATA17Q96L03 361 aa24■■□□□ 1.43
SKP1-206ENST00000519321 UHRF1Q96T88 793 aaPredicted RBP24■■□□□ 1.43
SKP1-206ENST00000519321 HNRNPABQ99729 332 aaKnown RBP24■■□□□ 1.43
SKP1-206ENST00000519321 LPIN3Q9BQK8 851 aa24■■□□□ 1.43
SKP1-206ENST00000519321 ZNF518BQ9C0D4 1074 aa24■■□□□ 1.43
SKP1-206ENST00000519321 CBX8Q9HC52 389 aa24■■□□□ 1.43
SKP1-206ENST00000519321 EHD2Q9NZN4 543 aa24■■□□□ 1.43
SKP1-206ENST00000519321 MRPS23Q9Y3D9 190 aaKnown RBP24■■□□□ 1.43
SKP1-206ENST00000519321 PCDHB4Q9Y5E5 795 aa24■■□□□ 1.43
SKP1-206ENST00000519321 SPTBN5Q9NRC6 3674 aaKnown RBP24■■□□□ 1.43
SKP1-206ENST00000519321 C19orf67A6NJJ6 358 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 LOC730098B7Z3J9 87 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 DDR2Q16832 855 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 FUKQ8N0W3 1084 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 C12orf29Q8N999 325 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 SLC2A14Q8TDB8 520 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 GIPC2Q8TF65 315 aa23.99■■□□□ 1.43
SKP1-206ENST00000519321 FAM49BQ9NUQ9 324 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms