RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 PBKQ96KB5 322 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-209ENST00000519141 CPXM1Q96SM3 734 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 MIS12Q9H081 205 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 RNF14Q9UBS8 474 aa13.09□□□□□ -0.31
SPIDR-209ENST00000519141 SLC34A2O95436 690 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 CCDC130P13994 396 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 COMTP21964 271 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 RFC2P35250 354 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 PAFAH1B1P43034 410 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 GSCP56915 257 aaPredicted RBP13.08□□□□□ -0.31
SPIDR-209ENST00000519141 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.31
SPIDR-209ENST00000519141 LRRC26Q2I0M4 334 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 TCTN1Q2MV58 587 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 DCUN1D2Q6PH85 259 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 CREG2Q8IUH2 290 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 C7orf61Q8IZ16 206 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 UBL4BQ8N7F7 174 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 FEZF2Q8TBJ5 459 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 HASPINQ8TF76 798 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 UBXN4Q92575 508 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 GOLGA1Q92805 767 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 SELENOOQ9BVL4 669 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 TRIM7Q9C029 511 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 ST7Q9NRC1 585 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 DDX43Q9NXZ2 648 aaKnown RBP13.08□□□□□ -0.31
SPIDR-209ENST00000519141 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 DSEQ9UL01 958 aa13.08□□□□□ -0.31
SPIDR-209ENST00000519141 TCRBV5S1A1TA0A578 114 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 GOLGA8SH3BPF8 625 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 I3L4J1 428 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 M0QZQ0 153 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 DDHD2O94830 711 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 ERBB2P04626 1255 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 PFKMP08237 780 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 PCSK1P29120 753 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 ADORA2BP29275 332 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 BRCC3P46736 316 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 GABRB2P47870 512 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 BCAT1P54687 386 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 SNX16P57768 344 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 BST2Q10589 180 aaKnown RBP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 CFAP221Q4G0U5 840 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 PKDCCQ504Y2 493 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 TTC30AQ86WT1 665 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 ZNF280BQ86YH2 543 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 MCEEQ96PE7 176 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 IP6K2Q9UHH9 426 aa13.08□□□□□ -0.32
SPIDR-209ENST00000519141 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-209ENST00000519141 COL6A3P12111 3177 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 TMEM189-UBE2V1I3L0A0 370 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 DDX3YO15523 660 aaKnown RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 B4GALT3O60512 393 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 PROSCO94903 275 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 GJB6O95452 261 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 CYP11A1P05108 521 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 SLC1A1P43005 524 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 OR1G1P47890 313 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 TUBB4BP68371 445 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 PDE4CQ08493 712 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 ZNF268Q14587 947 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 FNDC1Q4ZHG4 1894 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 CNKSR3Q6P9H4 555 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 CD300LGQ6UXG3 332 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 NPAS4Q8IUM7 802 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 ANKRD52Q8NB46 1076 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 STK32AQ8WU08 396 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 SUSD3Q96L08 255 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 MRPL9Q9BYD2 267 aaKnown RBP13.07□□□□□ -0.32
SPIDR-209ENST00000519141 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
SPIDR-209ENST00000519141 CCDC66A2RUB6 948 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 PDE2AO00408 941 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-209ENST00000519141 CEP104O60308 925 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 ATP2C2O75185 946 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 ITGB1P05556 798 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 KRT3P12035 628 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 CTNNA2P26232 953 aa13.06□□□□□ -0.32
SPIDR-209ENST00000519141 MAN1A1P33908 653 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms