RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 SLC17A8Q8NDX2 589 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 CPEB3Q8NE35 698 aaKnown RBP6.71□□□□□ -1.34
SQLE-203ENST00000518931 APPL2Q8NEU8 664 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 KLHDC4Q8TBB5 520 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 ZNF483Q8TF39 744 aaPredicted RBP6.71□□□□□ -1.34
SQLE-203ENST00000518931 TNPO1Q92973 898 aaKnown RBP6.71□□□□□ -1.34
SQLE-203ENST00000518931 ZBTB10Q96DT7 871 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 MYEOVQ96EZ4 313 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 FAM167AQ96KS9 214 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 SPAG5Q96R06 1193 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 PNKPQ96T60 521 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 NELL2Q99435 816 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 ARMT1Q9H993 441 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 SMYD2Q9NRG4 433 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 SMC4Q9NTJ3 1288 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 STXBP5LQ9Y2K9 1186 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 PCDHGB3Q9Y5G1 929 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 SNX5Q9Y5X3 404 aa6.71□□□□□ -1.34
SQLE-203ENST00000518931 PRSS29PA6NIE9 313 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 H3BML4 177 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 LPXNO60711 386 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 UBXN7O94888 489 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 ZNF202O95125 648 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 GPANK1O95872 356 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 GNAI3P08754 354 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 IFIT1P09914 478 aaKnown RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 MAKP20794 623 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 FGFR4P22455 802 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 KIF5BP33176 963 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 SSR1P43307 286 aaKnown RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 PIK3CGP48736 1102 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 GNAI1P63096 354 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 OCA2Q04671 838 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 BEAN1Q3B7T3 259 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 LMBRD2Q68DH5 695 aaPredicted RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 MRGPREQ86SM8 312 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 TEX9Q8N6V9 391 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 ARL10Q8N8L6 244 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 LENG9Q96B70 501 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 NUDT16L1Q9BRJ7 211 aaKnown RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 IMPG2Q9BZV3 1241 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 MRPL46Q9H2W6 279 aaKnown RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 BLOC1S4Q9NUP1 217 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 SEL1LQ9UBV2 794 aa6.7□□□□□ -1.34
SQLE-203ENST00000518931 MTO1Q9Y2Z2 717 aaKnown RBP6.7□□□□□ -1.34
SQLE-203ENST00000518931 TMEM200CA6NKL6 621 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 TOR1BO14657 336 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 CPLX1O14810 134 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 PLOD3O60568 738 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 FZD7O75084 574 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 FSHBP01225 129 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 GJB1P08034 283 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 FCER1AP12319 257 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 ZKSCAN1P17029 563 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 HTR1BP28222 390 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 BMPR1AP36894 532 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 BTKQ06187 659 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 SPDYE7PQ495Y7 208 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 HSP90AB3PQ58FF7 597 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 VPS53Q5VIR6 699 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 B3GNTL1Q67FW5 361 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 HIBCHQ6NVY1 386 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 PPP1R3BQ86XI6 285 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 ZBTB34Q8NCN2 500 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 TMIEQ8NEW7 156 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 PLBD2Q8NHP8 589 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 HDAC2Q92769 488 aaKnown RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 SLC35A4Q96G79 324 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 VMP1Q96GC9 406 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 TLR10Q9BXR5 811 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 MRPL9Q9BYD2 267 aaKnown RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 PRKRIP1Q9H875 184 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 ATP6V0A4Q9HBG4 840 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 C1orf112Q9NSG2 853 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 NKIRAS2Q9NYR9 191 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 CFAP97Q9P2B7 532 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 PDP2Q9P2J9 529 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 HSFX1Q9UBD0 423 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 NOX1Q9Y5S8 564 aa6.69□□□□□ -1.34
SQLE-203ENST00000518931 MAGED1Q9Y5V3 778 aaPredicted RBP6.69□□□□□ -1.34
SQLE-203ENST00000518931 CENPVL1A0A0U1RR11 272 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ANKRD18BA2A2Z9 1011 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 C19orf81C9J6K1 198 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
SQLE-203ENST00000518931 AHSGP02765 367 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ANXA1P04083 346 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 DDX6P26196 483 aaKnown RBP eCLIP6.68□□□□□ -1.34
SQLE-203ENST00000518931 CASQ1P31415 396 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 MCM7P33993 719 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 ZNF132P52740 706 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 MXRA7P84157 204 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 TRIM29Q14134 588 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 TRIM14Q14142 442 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 PSMD6Q15008 389 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 DNAJC21Q5F1R6 531 aaKnown RBP6.68□□□□□ -1.34
SQLE-203ENST00000518931 SLC10A5Q5PT55 438 aa6.68□□□□□ -1.34
SQLE-203ENST00000518931 CC2D1BQ5T0F9 858 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms