RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SLITRK3O94933 977 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 MX2P20592 715 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SOX10P56693 466 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 DLG4P78352 724 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 COG7P83436 770 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 NSUN2Q08J23 767 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 OVGP1Q12889 678 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 GRAMD1BQ3KR37 738 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 EMC10Q5UCC4 262 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 BTBD8Q5XKL5 378 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SUDS3Q9H7L9 328 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 GNGT2O14610 69 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 CST8O60676 142 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLURP2P0DP57 97 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ECHS1P30084 290 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 YWHAHQ04917 246 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 RCOR2Q8IZ40 523 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ELMO3Q96BJ8 720 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SIX2Q9NPC8 291 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLIT2O94813 1529 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 APOL1O14791 398 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 CSDE1O75534 798 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 GH1P01241 217 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 IL1R1P14778 569 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TAP1Q03518 808 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 RIPK1Q13546 671 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 PIGWQ7Z7B1 504 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 PGBD4Q96DM1 585 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 PCDHA2Q9Y5H9 948 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TISP43B9A030 160 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 DFFAO00273 331 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 HNRNPCL1O60812 293 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 MAP3K6O95382 1288 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 RBP3P10745 1247 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 PAMP19021 973 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 RPS12P25398 132 aaKnown RBP11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 MTFR1Q15390 333 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 MFSD14CQ5VZR4 134 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TTC27Q6P3X3 843 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 APPL2Q8NEU8 664 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 IFT43Q96FT9 208 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 TSSK1BQ9BXA7 367 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZDHHC18Q9NUE0 388 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 ERAP1Q9NZ08 941 aa11.32□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCL15-CCL14A0A0B4J2E2 113 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GOLGA8QA0A0J9YX86 632 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 TCRBV7S2A1N4TA0A589 114 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GOLGA8OA6NCC3 632 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 FOXO6A8MYZ6 492 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GOLGA8NF8WBI6 632 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 H3BRJ5 948 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 MEIS2O14770 477 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 KIF3CO14782 793 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 EXTL3O43909 919 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP2C9P11712 490 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 RRM1P23921 792 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CYP3A7P24462 503 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 NPTX2P47972 431 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CLCN3P51790 818 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PRAMEP78395 509 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PPATQ06203 517 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CCL15Q16663 113 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PGM1P36871 562 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 KIF19Q2TAC6 998 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 DCAF12L1Q5VU92 463 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 IER5Q5VY09 327 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPATA18Q8TC71 538 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PWWP2AQ96N64 755 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 SLC12A4Q9UP95 1085 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 GOLGB1Q14789 3259 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPECC1L-ADORA2AF8WAN1 911 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 MAGEB2O15479 319 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 UNC5CO95185 931 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 KRT4P19013 534 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 EPHB2P29323 1055 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 RFC5P40937 340 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 BACE1P56817 501 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 PPP3CAQ08209 521 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 RCN1Q15293 331 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 ZDHHC24Q6UX98 284 aa11.31□□□□□ -0.6
PCDHGA1-202ENST00000517417 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms