RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 TMEM35BQ8NCS4 154 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 OR10T2Q8NGX3 314 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LMO3Q8TAP4 145 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SLC7A14Q8TBB6 771 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SLC2A14Q8TDB8 520 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SHC3Q92529 594 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 KAT5Q92993 513 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 HLA-CQ95604 372 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MYLPFQ96A32 169 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MRFAP1L1Q96HT8 127 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 RIPOR3Q96MK2 946 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ARID3AQ99856 593 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MIS12Q9H081 205 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SDCBP2Q9H190 292 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 HSD3B7Q9H2F3 369 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SFXN1Q9H9B4 322 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 GRPEL1Q9HAV7 217 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 LRRC4Q9HBW1 653 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ABCB6Q9NP58 842 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 DMAP1Q9NPF5 467 aaPredicted RBP5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MAN1C1Q9NR34 630 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ST7Q9NRC1 585 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 MTMR10Q9NXD2 777 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ZDHHC7Q9NXF8 308 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 HSFX1Q9UBD0 423 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SIK3Q9Y2K2 1263 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 SLC27A5Q9Y2P5 690 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ASB3Q9Y575 518 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PCDHGC5Q9Y5F6 944 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 BZW2Q9Y6E2 419 aaKnown RBP5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 BRCA2P51587 3418 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 PTPRSQ13332 1948 aa5.78□□□□□ -1.48
SCARNA16.4-201ENST00000516956 ITIH6Q6UXX5 1313 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 NLRC5Q86WI3 1866 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GBF1Q92538 1859 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CCDC195A0A1B0GUA6 201 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 A0A1W2PQJ5 194 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 WDR27A2RRH5 827 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LRRC53A6NM62 1247 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 F8VZ95 297 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ZNF197O14709 1029 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CCL16O15467 120 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ADAM12O43184 909 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LILRB3O75022 631 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ZMYND10O75800 440 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ABLIM3O94929 683 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RTN3O95197 1032 aaPredicted RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 IPO7O95373 1038 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 EFEMP2O95967 443 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ABL1P00519 1130 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SETSIPP0DME0 302 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CSH1P0DML2 217 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CSH2P0DML3 217 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 HAPLN1P10915 354 aaPredicted RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CCDC130P13994 396 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 EPCAMP16422 314 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PTPN2P17706 415 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ACO1P21399 889 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CYP2F1P24903 491 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 BRD2P25440 801 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CASP14P31944 242 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MTHFRP42898 656 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CDR1P51861 262 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RAD23BP54727 409 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MAP3K7CLP57077 242 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 APBA1Q02410 837 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ITIH3Q06033 890 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 BST2Q10589 180 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TWF1Q12792 350 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 HYAL1Q12794 435 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CAMK1Q14012 370 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CNGA2Q16280 664 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PTPN21Q16825 1174 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 CFAP221Q4G0U5 840 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ARHGAP15Q53QZ3 475 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RARS2Q5T160 578 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ARHGAP17Q68EM7 881 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FAM171BQ6P995 826 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 RSPO2Q6UXX9 243 aaPredicted RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 TRIM72Q6ZMU5 477 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 APTXQ7Z2E3 356 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LIMS2Q7Z4I7 341 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ADGRD2Q7Z7M1 963 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FAM35AQ86V20 835 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ZNF677Q86XU0 584 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 FAM71AQ8IYT1 594 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SIX6OS1Q8N1H7 587 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 C12orf29Q8N999 325 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ANKRD52Q8NB46 1076 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SLC4A11Q8NBS3 891 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 SPC24Q8NBT2 197 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 ATAD1Q8NBU5 361 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 LEMD2Q8NC56 503 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 OR8K1Q8NGG5 319 aa5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 MAFAQ8NHW3 353 aaPredicted RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 IPO4Q8TEX9 1081 aaKnown RBP5.77□□□□□ -1.49
SCARNA16.4-201ENST00000516956 GIPC2Q8TF65 315 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms