RNA–Protein interactions for RNA: ENST00000516211.1

SCARNA17.1-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 143 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17.1-201ENST00000516211 SPATA6Q9NWH7 488 aaPredicted RBP3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 LMCD1Q9NZU5 365 aa3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 SLAMF8Q9P0V8 285 aa3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 PI4KBQ9UBF8 816 aa3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 MAGED1Q9Y5V3 778 aaPredicted RBP3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 KAT6BQ8WYB5 2073 aa3.03□□□□□ -1.92
SCARNA17.1-201ENST00000516211 ABCC5O15440 1437 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZFYVE9O95405 1425 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NALCNQ8IZF0 1738 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CNTNAP1P78357 1384 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SPATA31A1Q5TZJ5 1347 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 A0A1W2PR48 441 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CCDC78A2IDD5 438 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 HMX2A2RU54 273 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 AQP7P3A6NL99 342 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 F8W031 263 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 F2RL2O00254 374 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CLGNO14967 610 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CYP26A1O43174 497 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CCNT2O60583 730 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 USO1O60763 962 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 COQ9O75208 318 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TBCAO75347 108 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 LY86O95711 162 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MPIG6BO95866 241 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ABHD16AO95870 558 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 AHSGP02765 367 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 HNRNPCP07910 306 aaKnown RBP eCLIP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RARBP10826 455 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ACADMP11310 421 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 HOXB4P17483 251 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 TPH1P17752 444 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 EGR1P18146 543 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FUT4P22083 530 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ACVR2AP27037 513 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GALNSP34059 522 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PTPN7P35236 360 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PLA2G5P39877 138 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PAFAH1B1P43034 410 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MAN2A2P49641 1150 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FLT3LGP49771 235 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NR1H2P55055 460 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NOMO3P69849 1222 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ROR1Q01973 937 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PTH1RQ03431 593 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SCAPQ12770 1279 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLC29A2Q14542 456 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 WTAPQ15007 396 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RPS6KA2Q15349 733 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GPR68Q15743 365 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 INSCQ1MX18 579 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 WDR72Q3MJ13 1102 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PABPC1LQ4VXU2 614 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GPATCH4Q5T3I0 446 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FAXCQ5TGI0 409 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 RNF43Q68DV7 783 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GRAMD4Q6IC98 578 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 LIN54Q6MZP7 749 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MRNIPQ6NTE8 343 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLC30A6Q6NXT4 461 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NFRKBQ6P4R8 1299 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 LRSAM1Q6UWE0 723 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 B4GALNT4Q76KP1 1039 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GET4Q7L5D6 327 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 OTOP2Q7RTS6 562 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CPLX4Q7Z7G2 160 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ALYREFQ86V81 257 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZSCAN30Q86W11 494 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MICU3Q86XE3 530 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 FAM90A1Q86YD7 464 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CPOQ8IVL8 374 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLC44A2Q8IWA5 706 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 C16orf71Q8IYS4 520 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 BEND7Q8N7W2 519 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 VGLL2Q8N8G2 317 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GLIS1Q8NBF1 620 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PDZD8Q8NEN9 1154 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 NLGN4YQ8NFZ3 816 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 AFAP1L1Q8TED9 768 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 WDR60Q8WVS4 1066 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CPT1BQ92523 772 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 HOXB13Q92826 284 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CUL5Q93034 780 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 GFM2Q969S9 779 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 C3orf49Q96BT1 292 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 MEGF10Q96KG7 1140 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 ZMAT2Q96NC0 199 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PPP1R9BQ96SB3 815 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 SLF1Q9BQI6 1058 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 G6PC3Q9BUM1 346 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 AMNQ9BXJ7 453 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PAIP1Q9H074 479 aaKnown RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 BRD8Q9H0E9 1235 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 C11orf54Q9H0W9 315 aaPredicted RBP3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PCDHAC1Q9H158 963 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 CHST8Q9H2A9 424 aa3.02□□□□□ -1.93
SCARNA17.1-201ENST00000516211 PCDH18Q9HCL0 1135 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms