RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-222ENST00000515494 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 TMEM35BQ8NCS4 154 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 ZNF296Q8WUU4 475 aaPredicted RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 C18orf25Q96B23 403 aaPredicted RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 TBC1D31Q96DN5 1066 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 TRIM11Q96F44 468 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 MTG1Q9BT17 334 aaPredicted RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 CHST7Q9NS84 486 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 DPP3Q9NY33 737 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 RPS6KL1Q9Y6S9 549 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 DARSP14868 501 aaKnown RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 ZNF252P-AS1Q0IIN9 211 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 TRIP13Q15645 432 aaPredicted RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 PTPN20Q4JDL3 420 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 SH2D3CQ8N5H7 860 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 RNF169Q8NCN4 708 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 RUFY1Q96T51 708 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 ERP44Q9BS26 406 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 PARP2Q9UGN5 583 aa11.11□□□□□ -0.63
CDK18-222ENST00000515494 R3HDM2Q9Y2K5 976 aaKnown RBP11.11□□□□□ -0.63
CDK18-222ENST00000515494 SMIM35A0A1B0GVV1 85 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 MBLAC1A4D2B0 266 aaPredicted RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 PTGIRP43119 386 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 GJA9P57773 515 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 DNAJC24Q6P3W2 148 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 EMC1Q8N766 993 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 SLC4A11Q8NBS3 891 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 MRPL47Q9HD33 250 aaKnown RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 PARVAQ9NVD7 372 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 SCN1AP35498 2009 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 IGHA2P01877 340 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 RALAP11233 206 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 ADAM17P78536 824 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 CUL1Q13616 776 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 UAP1Q16222 522 aaPredicted RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 SGO2Q562F6 1265 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 KAZNQ674X7 775 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 IQCKQ8N0W5 287 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 HEXIM2Q96MH2 286 aaKnown RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 ASB7Q9H672 318 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 TUBGCP4Q9UGJ1 667 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 CITO14578 2027 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 MEIS3P2A8K0S8 358 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 HCRTO43612 131 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 KRT10P13645 584 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 HSD17B3P37058 310 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 THEMIS2Q5TEJ8 643 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 TWF2Q6IBS0 349 aaKnown RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 TRIM73Q86UV7 250 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 FBXO25Q8TCJ0 367 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 UBLCP1Q8WVY7 318 aaPredicted RBP11.1□□□□□ -0.63
CDK18-222ENST00000515494 CPXM1Q96SM3 734 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 BCO2Q9BYV7 579 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 LRRC4CQ9HCJ2 640 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 PLAAQ9Y263 795 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 CDY2AQ9Y6F7 541 aa11.1□□□□□ -0.63
CDK18-222ENST00000515494 ANKRD33BA6NCL7 494 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 EIF3HO15372 352 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDK18-222ENST00000515494 COILP38432 576 aaPredicted RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 THPOP40225 353 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 RPL21P46778 160 aaKnown RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 VPS41P49754 854 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 DHX9Q08211 1270 aaKnown RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 IFT88Q13099 833 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 TTMPQ5BVD1 217 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 UBAP2Q5T6F2 1119 aaKnown RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 DUPD1Q68J44 220 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 PRUNE1Q86TP1 453 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 JOSD2Q8TAC2 188 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 GOLGA2P5Q9HBQ8 144 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 MTUS1Q9ULD2 1270 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 ATP8A1Q9Y2Q0 1164 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 TRIM17Q9Y577 477 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 TMEM191CA6NGB0 347 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 ADAMTS4O75173 837 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 CHRNA3P32297 505 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 RFC1P35251 1148 aaPredicted RBP11.09□□□□□ -0.63
CDK18-222ENST00000515494 FNTAP49354 379 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 NDST1P52848 882 aa11.09□□□□□ -0.63
CDK18-222ENST00000515494 PTPN11Q06124 597 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms