RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 RASSF8Q8NHQ8 419 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
LMNA-223ENST00000515459 RAD54LQ92698 747 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 EZH1Q92800 747 aaPredicted RBP16.95■□□□□ 0.3
LMNA-223ENST00000515459 ATP2A3Q93084 1043 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 TRMT2BQ96GJ1 504 aaKnown RBP16.95■□□□□ 0.3
LMNA-223ENST00000515459 ACBD6Q9BR61 282 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 TRPC7Q9HCX4 862 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 ABCB6Q9NP58 842 aa16.95■□□□□ 0.3
LMNA-223ENST00000515459 ANAPC1Q9H1A4 1944 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 TADA3O75528 432 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 NOL4O94818 638 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 IL18RAPO95256 599 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 PLCG1P19174 1290 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 DGKEP52429 567 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 NR1H3Q13133 447 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 POSTNQ15063 836 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 ZNF77Q15935 545 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 DDR2Q16832 855 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 CRELD2Q6UXH1 353 aaPredicted RBP16.94■□□□□ 0.3
LMNA-223ENST00000515459 C11orf74Q86VG3 221 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 CCDC26Q8TAB7 109 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 MYRFLQ96LU7 910 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 CYP2S1Q96SQ9 504 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 KIF2CQ99661 725 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 ST6GALNAC4Q9H4F1 302 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 TMEM206Q9H813 350 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 DDX43Q9NXZ2 648 aaKnown RBP16.94■□□□□ 0.3
LMNA-223ENST00000515459 WNT6Q9Y6F9 365 aa16.94■□□□□ 0.3
LMNA-223ENST00000515459 HELZP42694 1942 aaKnown RBP16.94■□□□□ 0.3
LMNA-223ENST00000515459 THADAQ6YHU6 1953 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 TRAV19A0A0A6YYK7 116 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 LNP1A1A4G5 178 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 H3BQV1 296 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 HUS1O60921 280 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 CKMP06732 381 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 CYP2F1P24903 491 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 MYL7Q01449 175 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 USP4Q13107 963 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 EML3Q32P44 896 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 USP39Q53GS9 565 aaKnown RBP16.93■□□□□ 0.3
LMNA-223ENST00000515459 INTS6LQ5JSJ4 861 aaKnown RBP16.93■□□□□ 0.3
LMNA-223ENST00000515459 TMEM86AQ8N2M4 240 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 FSIP1Q8NA03 581 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 TSTD1Q8NFU3 115 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 LARP4BQ92615 738 aaKnown RBP16.93■□□□□ 0.3
LMNA-223ENST00000515459 SLC22A12Q96S37 553 aa16.93■□□□□ 0.3
LMNA-223ENST00000515459 RALYQ9UKM9 306 aaKnown RBP16.93■□□□□ 0.3
LMNA-223ENST00000515459 C1QTNF9BB2RNN3 333 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 GIPC1O14908 333 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 ITGB3P05106 788 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 C1QTNF9P0C862 333 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 POLR2BP30876 1174 aaKnown RBP16.92■□□□□ 0.3
LMNA-223ENST00000515459 TFAMQ00059 246 aaKnown RBP16.92■□□□□ 0.3
LMNA-223ENST00000515459 ZNF252P-AS1Q0IIN9 211 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 PMS2CLQ68D20 193 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 UNQ6494/PRO21346Q6UXR6 183 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 ZNF720Q7Z2F6 126 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 KRI1Q8N9T8 703 aaKnown RBP16.92■□□□□ 0.3
LMNA-223ENST00000515459 HVCN1Q96D96 273 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 TMEM9BQ9NQ34 198 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 GTF3C4Q9UKN8 822 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 AGAP1Q9UPQ3 857 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
LMNA-223ENST00000515459 ABCA7Q8IZY2 2146 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 KHNYNO15037 678 aaKnown RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 ACAT1P24752 427 aaKnown RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 ADSSP30520 456 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 LONP1P36776 959 aaKnown RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 KCNB1Q14721 858 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 CFAP221Q4G0U5 840 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 SH3PXD2AQ5TCZ1 1133 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 SPATA2LQ8IUW3 424 aaPredicted RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 ARL14EPQ8N8R7 260 aaPredicted RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 SH3RF2Q8TEC5 729 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
LMNA-223ENST00000515459 PKMYT1Q99640 499 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 TPSD1Q9BZJ3 242 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 IKZF4Q9H2S9 585 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 PPP4R2Q9NY27 417 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 GCNT4Q9P109 453 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 CEP295Q9C0D2 2601 aa16.91■□□□□ 0.3
LMNA-223ENST00000515459 NFATC1O95644 943 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 CEACAM1P13688 526 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 TCF3P15923 654 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 DDIT3P35638 169 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 FOXC1Q12948 553 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 C2orf27AQ580R0 203 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 ANO7Q6IWH7 933 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 RASSF3Q86WH2 238 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 SFR1Q86XK3 245 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 SCN4BQ8IWT1 228 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 LRRC52Q8N7C0 313 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 C1orf127Q8N9H9 656 aa16.9■□□□□ 0.3
LMNA-223ENST00000515459 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms