RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TRIP10Q15642 601 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 CIAPIN1Q6FI81 312 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 OLFML1Q6UWY5 402 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 MYCT1Q8N699 235 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 EXD1Q8NHP7 514 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 RAB3IL1Q8TBN0 382 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 PAFAH2Q99487 392 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 HERPUD2Q9BSE4 406 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
SMAD1-215ENST00000515385 ARHGEF38Q9NXL2 777 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 C6orf203Q9P0P8 240 aaPredicted RBP13.41□□□□□ -0.26
SMAD1-215ENST00000515385 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
SMAD1-215ENST00000515385 TNRC6CQ9HCJ0 1690 aaKnown RBP13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ARHGAP42A6NI28 874 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 MATN2O00339 956 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 NTSR2O95665 410 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ALOX15P16050 662 aaPredicted RBP13.4□□□□□ -0.26
SMAD1-215ENST00000515385 BGNP21810 368 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 PEX2P28328 305 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 HSPA13P48723 471 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 HDAC4P56524 1084 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 LLGL1Q15334 1064 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ZNF280DQ6N043 979 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 NLRX1Q86UT6 975 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ZNF410Q86VK4 478 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 FBXO27Q8NI29 283 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 SLC26A7Q8TE54 656 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ITPKCQ96DU7 683 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 HAUS8Q9BT25 410 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 ZNF711Q9Y462 761 aa13.4□□□□□ -0.26
SMAD1-215ENST00000515385 TMEM247A6NEH6 219 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 MEIS1O00470 390 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 LIASO43766 372 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 LDHCP07864 332 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 FDX1P10109 184 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 CPOXP36551 454 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 GPX6P59796 221 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 BTKQ06187 659 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 APOFQ13790 326 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.27
SMAD1-215ENST00000515385 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.27
SMAD1-215ENST00000515385 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 PGM2L1Q6PCE3 622 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 NSMFQ6X4W1 530 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 ZNF720Q7Z2F6 126 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 TMEM110Q86TL2 294 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 DCAKDQ8WVC6 231 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 BHMTQ93088 406 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 ABHD8Q96I13 439 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 EXOC7Q9UPT5 735 aa13.4□□□□□ -0.27
SMAD1-215ENST00000515385 HBS1LQ9Y450 684 aaKnown RBP13.4□□□□□ -0.27
SMAD1-215ENST00000515385 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 FAM170AA1A519 330 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 FAM155BO75949 473 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 KLHL2O95198 593 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 CYP11B1P15538 503 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 PMLP29590 882 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 NMT1P30419 496 aaKnown RBP13.39□□□□□ -0.27
SMAD1-215ENST00000515385 SLC5A2P31639 672 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 ARSEP51690 589 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 GPS1Q13098 491 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 NCOA4Q13772 614 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 CCNIQ14094 377 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 HIF1AQ16665 826 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 RNF111Q6ZNA4 994 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 SLC25A41Q8N5S1 370 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
SMAD1-215ENST00000515385 SHC3Q92529 594 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 TTC17Q96AE7 1141 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 MRRFQ96E11 262 aaKnown RBP13.39□□□□□ -0.27
SMAD1-215ENST00000515385 HEMGNQ9BXL5 484 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 STN1Q9H668 368 aaKnown RBP13.39□□□□□ -0.27
SMAD1-215ENST00000515385 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
SMAD1-215ENST00000515385 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
SMAD1-215ENST00000515385 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
SMAD1-215ENST00000515385 CCDC162PA2VCL2 907 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 PROSCO94903 275 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 ALDH2P05091 517 aa13.38□□□□□ -0.27
SMAD1-215ENST00000515385 HOXD12P35452 270 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms