RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 FAM187BQ17R55 369 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 Q4G0T1 1027 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 HES3Q5TGS1 186 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 TXNDC8Q6A555 127 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 PPP4R3AQ6IN85 833 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 DHX40Q8IX18 779 aaKnown RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 CCDC12Q8WUD4 166 aaPredicted RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 KCNE4Q8WWG9 221 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 TSC1Q92574 1164 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 MRPS31Q92665 395 aaKnown RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 YTHDC1Q96MU7 727 aaKnown RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 WRAP73Q9P2S5 460 aaPredicted RBP12.89□□□□□ -0.35
SFXN1-210ENST00000513725 NID2Q14112 1375 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
SFXN1-210ENST00000513725 CABIN1Q9Y6J0 2220 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 LRRIQ4A6NIV6 560 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 BCAT2O15382 392 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 KLK10O43240 276 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 KIR2DL1P43626 348 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 NFKB2Q00653 900 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 ZNF77Q15935 545 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 TRMT11Q7Z4G4 463 aaKnown RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 USP37Q86T82 979 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 TTC9BQ8N6N2 239 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 ZNF578Q96N58 590 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 PNKPQ96T60 521 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 DPH1Q9BZG8 443 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 LRRC4CQ9HCJ2 640 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
SFXN1-210ENST00000513725 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
SFXN1-210ENST00000513725 TRIP11Q15643 1979 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 EML1O00423 815 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 KAT7O95251 611 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
SFXN1-210ENST00000513725 POU3F2P20265 443 aaPredicted RBP12.87□□□□□ -0.35
SFXN1-210ENST00000513725 NMT1P30419 496 aaKnown RBP12.87□□□□□ -0.35
SFXN1-210ENST00000513725 MCM5P33992 734 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 TNFRSF4P43489 277 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 NLRP12P59046 1061 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 BNC1Q01954 994 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 XKR5Q6UX68 686 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
SFXN1-210ENST00000513725 LXNQ9BS40 222 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 ZDHHC4Q9NPG8 344 aa12.87□□□□□ -0.35
SFXN1-210ENST00000513725 MYLKQ15746 1914 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 BLACEA4D250 179 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 CLEC18AA5D8T8 446 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 K7ENP7 123 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 ENC1O14682 589 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 EDIL3O43854 480 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 PCDHGA12O60330 932 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 DGAT1O75907 488 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 F11P03951 625 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 CCT8P50990 548 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 TLE1Q04724 770 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 FUT2Q10981 343 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 USP4Q13107 963 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 MGAT5BQ3V5L5 792 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 INO80CQ6PI98 192 aaPredicted RBP12.86□□□□□ -0.35
SFXN1-210ENST00000513725 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 TMEM150AQ86TG1 271 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 SFTPA1Q8IWL2 248 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 FAM26EQ8N5C1 309 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 CLEC18CQ8NCF0 446 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 KCNV2Q8TDN2 545 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 HIC2Q96JB3 615 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 LINC00597Q9H2U6 94 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 DENND4CQ5VZ89 1909 aa12.86□□□□□ -0.35
SFXN1-210ENST00000513725 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
SFXN1-210ENST00000513725 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 LARGE1O95461 756 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 USP17L7P0C7H9 530 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 HOXB2P14652 356 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 ATF6P18850 670 aa12.85□□□□□ -0.35
SFXN1-210ENST00000513725 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms