RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 NR1H3Q13133 447 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 MAPK7Q13164 816 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 MINDY1Q8N5J2 469 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 PNPLA1Q8N8W4 532 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 GLIS3Q8NEA6 775 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 SPPL2BQ8TCT7 592 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 C2orf15Q8WU43 125 aaKnown RBP11.35□□□□□ -0.59
CLDND1-227ENST00000513452 HMGB4Q8WW32 186 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 DRC1Q96MC2 740 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 CAMK1GQ96NX5 476 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 RUSC1Q9BVN2 902 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 HAPLN2Q9GZV7 340 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 DDX19AQ9NUU7 478 aaKnown RBP11.35□□□□□ -0.59
CLDND1-227ENST00000513452 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 CELSR3Q9NYQ7 3312 aa11.35□□□□□ -0.59
CLDND1-227ENST00000513452 OBSL1O75147 1896 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 SFI1A8K8P3 1242 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 CYP11A1P05108 521 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 FTH1P19P0C7X4 201 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 CD59P13987 128 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 HOXD12P35452 270 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 OPRD1P41143 372 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 HNRNPDQ14103 355 aaKnown RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 TRIP6Q15654 476 aaKnown RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 ZNF174Q15697 407 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 ENOX2Q16206 610 aaKnown RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 DUOXA1Q1HG43 343 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 SDHAF4Q5VUM1 108 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 PEAR1Q5VY43 1037 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 CCNI2Q6ZMN8 369 aaPredicted RBP11.34□□□□□ -0.59
CLDND1-227ENST00000513452 LRRTM3Q86VH5 581 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 ADAMTS14Q8WXS8 1223 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 BICD1Q96G01 975 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 SLC22A12Q96S37 553 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 CYP2S1Q96SQ9 504 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 TM6SF1Q9BZW5 370 aa11.34□□□□□ -0.59
CLDND1-227ENST00000513452 PTPRDP23468 1912 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 TRAV19A0A0A6YYK7 116 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 E9PMD0 336 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SGK1O00141 431 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SH3BP5O60239 455 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PRB1P04280 392 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SERPINF2P08697 491 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 CSH1P0DML2 217 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 CSH2P0DML3 217 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 RPL6Q02878 288 aaKnown RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 TRIM29Q14134 588 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 MAP7D1Q3KQU3 841 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 ZC2HC1CQ53FD0 456 aaPredicted RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 ZPBP2Q6X784 338 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 METTL23Q86XA0 190 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SFTPA1Q8IWL2 248 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 THEM5Q8N1Q8 247 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 IL17RCQ8NAC3 791 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 TXNDC5Q8NBS9 432 aaKnown RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 CEP76Q8TAP6 659 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SH3RF2Q8TEC5 729 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SNX29Q8TEQ0 813 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PYM1Q9BRP8 204 aaKnown RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 TMEM206Q9H813 350 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 CAPN10Q9HC96 672 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 SCUBE2Q9NQ36 999 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 DSEQ9UL01 958 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PCDHB5Q9Y5E4 795 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 ZNF638Q14966 1978 aaKnown RBP11.33□□□□□ -0.6
CLDND1-227ENST00000513452 ACACAQ13085 2346 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
CLDND1-227ENST00000513452 PCDH15Q96QU1 1955 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 CYB561D2O14569 222 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 AP5Z1O43299 807 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 PRPF40AO75400 957 aaKnown RBP11.32□□□□□ -0.6
CLDND1-227ENST00000513452 NFATC1O95644 943 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 NFICP08651 508 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
CLDND1-227ENST00000513452 TIE1P35590 1138 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 MRPS21P82921 87 aaKnown RBP11.32□□□□□ -0.6
CLDND1-227ENST00000513452 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 MESP2Q0VG99 397 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 SMARCB1Q12824 385 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 BYSLQ13895 437 aaKnown RBP11.32□□□□□ -0.6
CLDND1-227ENST00000513452 SPDYCQ5MJ68 293 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 WSCD1Q658N2 575 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 NAXDQ8IW45 347 aa11.32□□□□□ -0.6
CLDND1-227ENST00000513452 DCP1BQ8IZD4 617 aaKnown RBP11.32□□□□□ -0.6
CLDND1-227ENST00000513452 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms