RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KMT5AQ9NQR1 393 aa12.12□□□□□ -0.47
RNF4-218ENST00000513284 TMLHEQ9NVH6 421 aa12.12□□□□□ -0.47
RNF4-218ENST00000513284 ACACAQ13085 2346 aa12.12□□□□□ -0.47
RNF4-218ENST00000513284 OBSL1O75147 1896 aa12.12□□□□□ -0.47
RNF4-218ENST00000513284 PIRO00625 290 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 MAP3K13O43283 966 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 FAM189A1O60320 539 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 PFKFB2O60825 505 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 HIP1RO75146 1068 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 SERPINF2P08697 491 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 MUTP22033 750 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
RNF4-218ENST00000513284 RDXP35241 583 aaKnown RBP12.11□□□□□ -0.47
RNF4-218ENST00000513284 SLC6A11P48066 632 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 FAM160A1Q05DH4 1040 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 NBR1Q14596 966 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 SPDYCQ5MJ68 293 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 SPATA1Q5VX52 437 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 HDDC3Q8N4P3 179 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 MINDY1Q8N5J2 469 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 ALLCQ8N6M5 410 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 IL17RCQ8NAC3 791 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 GCNAQ96QF7 691 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 RUSC1Q9BVN2 902 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 DNAAF2Q9NVR5 837 aaKnown RBP12.11□□□□□ -0.47
RNF4-218ENST00000513284 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 UBQLN1Q9UMX0 589 aaKnown RBP12.11□□□□□ -0.47
RNF4-218ENST00000513284 KIAA1024Q9UPX6 916 aa12.11□□□□□ -0.47
RNF4-218ENST00000513284 RBM19Q9Y4C8 960 aaKnown RBP12.11□□□□□ -0.47
RNF4-218ENST00000513284 ANO9A1A5B4 782 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 E9PMD0 336 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 OPHN1O60890 802 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 ADAM23O75077 832 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 CFIP05156 583 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 NEFLP07196 543 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 CLTAP09496 248 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 USP4Q13107 963 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 NOLC1Q14978 699 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF4-218ENST00000513284 ENOX2Q16206 610 aaKnown RBP12.1□□□□□ -0.47
RNF4-218ENST00000513284 TAF12Q16514 161 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 C1orf186Q6ZWK4 172 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
RNF4-218ENST00000513284 C4orf32Q8N8J7 132 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 TXNDC5Q8NBS9 432 aaKnown RBP12.1□□□□□ -0.47
RNF4-218ENST00000513284 TMEM161BQ8NDZ6 487 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 ATP2A3Q93084 1043 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 EXOC4Q96A65 974 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 ZDHHC4Q9NPG8 344 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 CFAP46Q8IYW2 2715 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 PTPRBP23467 1997 aa12.1□□□□□ -0.47
RNF4-218ENST00000513284 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 A0A0A0MRY4 1105 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 ARHGAP33O14559 1287 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 CLDN3O15551 220 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 CBFA2T3O75081 653 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 MAPTP10636 758 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 ODC1P11926 461 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 CCT6AP40227 531 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 KIR2DL1P43626 348 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 IFNAR2P48551 515 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 ATXN3P54252 364 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNF4-218ENST00000513284 ZNF174Q15697 407 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 RINT1Q6NUQ1 792 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 ZPBP2Q6X784 338 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 SLC41A1Q8IVJ1 513 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 ARL14EPQ8N8R7 260 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 C2orf15Q8WU43 125 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 MRPS31Q92665 395 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 ABI2Q9NYB9 513 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 DKK4Q9UBT3 224 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
RNF4-218ENST00000513284 SCN1AP35498 2009 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 PLXND1Q9Y4D7 1925 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 TSC2P49815 1807 aa12.09□□□□□ -0.47
RNF4-218ENST00000513284 C2orf78A6NCI8 922 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 ALDH1A2O94788 518 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 KLF8O95600 359 aaPredicted RBP12.08□□□□□ -0.48
RNF4-218ENST00000513284 HOXD12P35452 270 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 TIE1P35590 1138 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 C19orf57Q0VDD7 668 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 HNRNPDQ14103 355 aaKnown RBP12.08□□□□□ -0.48
RNF4-218ENST00000513284 DDR2Q16832 855 aa12.08□□□□□ -0.48
RNF4-218ENST00000513284 WSCD1Q658N2 575 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms