RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 UXTQ9UBK9 157 aaPredicted RBP17.21■□□□□ 0.35
DDR1-269ENST00000512725 KLK13Q9UKR3 277 aa17.21■□□□□ 0.35
DDR1-269ENST00000512725 SCN1AP35498 2009 aa17.21■□□□□ 0.35
DDR1-269ENST00000512725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 PLA2G4BP0C869 781 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 ACOT2P49753 483 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 ATXN3P54252 364 aaPredicted RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 NCKAP1LP55160 1127 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 SIM1P81133 766 aaPredicted RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 LMAN2Q12907 356 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 ZNF268Q14587 947 aaPredicted RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 IL17AQ16552 155 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 DDR2Q16832 855 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 TMEFF1Q8IYR6 380 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 MYCT1Q8N699 235 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 SPACA7Q96KW9 195 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 TMLHEQ9NVH6 421 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDR1-269ENST00000512725 OBSL1O75147 1896 aa17.2■□□□□ 0.34
DDR1-269ENST00000512725 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
DDR1-269ENST00000512725 ZFYVE26Q68DK2 2539 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 ANO9A1A5B4 782 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 ALDH1A2O94788 518 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 SEC24BO95487 1268 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 CFIP05156 583 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 RDXP35241 583 aaKnown RBP17.19■□□□□ 0.34
DDR1-269ENST00000512725 ZNF77Q15935 545 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 EML3Q32P44 896 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 LPCAT2Q7L5N7 544 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 EFCAB13Q8IY85 973 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 PGBD3Q8N328 593 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 ARL14EPQ8N8R7 260 aaPredicted RBP17.19■□□□□ 0.34
DDR1-269ENST00000512725 MDGA1Q8NFP4 955 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 FBXO18Q8NFZ0 1043 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 USP33Q8TEY7 942 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 SLC22A12Q96S37 553 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 GTPBP2Q9BX10 602 aaKnown RBP17.19■□□□□ 0.34
DDR1-269ENST00000512725 LINC00597Q9H2U6 94 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
DDR1-269ENST00000512725 NEUROG3Q9Y4Z2 214 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 AKAP13Q12802 2813 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 KIAA1549LQ6ZVL6 1849 aa17.19■□□□□ 0.34
DDR1-269ENST00000512725 ANTXRLA6NF34 631 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 FAM189A1O60320 539 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 FAM13AO94988 1023 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 ENGP17813 658 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 SLC12A3P55017 1021 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 RPL10AP62906 217 aaKnown RBP17.18■□□□□ 0.34
DDR1-269ENST00000512725 KCNB1Q14721 858 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 SV2CQ496J9 727 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 HDDC3Q8N4P3 179 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 CNOT6LQ96LI5 555 aaKnown RBP17.18■□□□□ 0.34
DDR1-269ENST00000512725 PNMA5Q96PV4 448 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 DERAQ9Y315 318 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 MSRB2Q9Y3D2 182 aa17.18■□□□□ 0.34
DDR1-269ENST00000512725 ASCC3Q8N3C0 2202 aaKnown RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 A0A0B4J269 797 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 KPNA7A9QM74 516 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 K7EQS6 105 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 LAD1O00515 517 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 TADA3O75528 432 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 NFATC1O95644 943 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 ADRB2P07550 413 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 ACAT1P24752 427 aaKnown RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 CYP2F1P24903 491 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 TOB1P50616 345 aaPredicted RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 USP4Q13107 963 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 NFE2Q16621 373 aaPredicted RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 ZC2HC1CQ53FD0 456 aaPredicted RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 C19orf48Q6RUI8 117 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 FSCN3Q9NQT6 498 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 EVLQ9UI08 416 aaPredicted RBP17.17■□□□□ 0.34
DDR1-269ENST00000512725 MMP17Q9ULZ9 603 aa17.17■□□□□ 0.34
DDR1-269ENST00000512725 C2orf78A6NCI8 922 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 KLF8O95600 359 aaPredicted RBP17.16■□□□□ 0.34
DDR1-269ENST00000512725 TIE1P35590 1138 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 PRPHP41219 470 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 PTGER3P43115 390 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 CRY1Q16526 586 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 LMBRD2Q68DH5 695 aaPredicted RBP17.16■□□□□ 0.34
DDR1-269ENST00000512725 RASSF3Q86WH2 238 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 GPBP1Q86WP2 473 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 SYT12Q8IV01 421 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 CHCHD4Q8N4Q1 142 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 ALLCQ8N6M5 410 aa17.16■□□□□ 0.34
DDR1-269ENST00000512725 FRMD1Q8N878 549 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms