RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 PPARGC1AQ9UBK2 798 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 NUDT5Q9UKK9 219 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 ZMYM2Q9UBW7 1377 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 A0A0A6YYK5 440 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CDH16O75309 829 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KRT4P19013 534 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 FECHP22830 423 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 BMPR2Q13873 1038 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 TFDP2Q14188 446 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 TMEM192Q8IY95 271 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 RCOR2Q8IZ40 523 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 DNAJB3Q8WWF6 145 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 UBP1Q9NZI7 540 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 SLC26A4O43511 780 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 HMBSP08397 361 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 PTPN11Q06124 597 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KIRREL3Q8IZU9 778 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 KLC2Q9H0B6 622 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CD248Q9HCU0 757 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
PRDM16-207ENST00000512462 IRAK4Q9NWZ3 460 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 AFG3L2Q9Y4W6 797 aa12.51□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC160A6NGH7 325 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 TCF4P15884 667 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 NCF2P19878 526 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 TNFAIP2Q03169 654 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ZACNQ401N2 412 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 TMEM63BQ5T3F8 832 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ERP27Q96DN0 273 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 GOLGA2P5Q9HBQ8 144 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 CITO14578 2027 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 RIPK2O43353 540 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 LPXNO60711 386 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ABCG1P45844 678 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 RABGGTBP53611 331 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 SLC12A2P55011 1212 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 REPS2Q8NFH8 660 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 JOSD2Q8TAC2 188 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 TSPAN16Q9UKR8 245 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 E5RJQ4 531 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 PDHXO00330 501 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 AGTP01019 485 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 LVRNQ6Q4G3 990 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 CES3Q6UWW8 571 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 SPOCD1Q6ZMY3 1216 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 C4orf50Q6ZRC1 276 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 IQCKQ8N0W5 287 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 FAM172AQ8WUF8 416 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 PGBD4Q96DM1 585 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-207ENST00000512462 MBOAT7Q96N66 472 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 ECT2Q9H8V3 914 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
PRDM16-207ENST00000512462 TBC1D12O60347 775 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 RARGP13631 454 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 CHRNB2P17787 502 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 MUTP22033 750 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 PEX19P40855 299 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 JAM2P57087 298 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 GCNT1Q02742 428 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 MAMLD1Q13495 774 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 PIGHQ14442 188 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 ATP11CQ8NB49 1132 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 FBXO36Q8NEA4 188 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 MORC4Q8TE76 937 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 CCDC124Q96CT7 223 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 FAM167BQ9BTA0 163 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NAALADL1Q9UQQ1 740 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 NR2E3Q9Y5X4 410 aa12.49□□□□□ -0.41
PRDM16-207ENST00000512462 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
PRDM16-207ENST00000512462 ACO1P21399 889 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms