RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CAPN9O14815 690 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 AP5Z1O43299 807 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 CCNT1O60563 726 aaKnown RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 TADA3O75528 432 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 IFNAR1P17181 557 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 ATP2B1P20020 1258 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 TIE1P35590 1138 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 SLC6A11P48066 632 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 AARSP49588 968 aaKnown RBP eCLIP9.91□□□□□ -0.82
NUP54-211ENST00000512151 MRPS21P82921 87 aaKnown RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 GRIK2Q13002 908 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 USP4Q13107 963 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 MYBPC2Q14324 1141 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 ZNF268Q14587 947 aaPredicted RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 PLEKHG6Q3KR16 790 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 LMBRD2Q68DH5 695 aaPredicted RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 MON1AQ86VX9 555 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 EFCAB13Q8IY85 973 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 PDCD7Q8N8D1 485 aaKnown RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 FAM181AQ8N9Y4 354 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 DEPTORQ8TB45 409 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 SETD7Q8WTS6 366 aaKnown RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 ATP2A3Q93084 1043 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 HSPA12BQ96MM6 686 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 CCDC43Q96MW1 224 aaKnown RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 CYP2S1Q96SQ9 504 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 TOPORSQ9NS56 1045 aaPredicted RBP9.91□□□□□ -0.82
NUP54-211ENST00000512151 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 DOPEY2Q9Y3R5 2298 aa9.91□□□□□ -0.82
NUP54-211ENST00000512151 CABIN1Q9Y6J0 2220 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 IGHV1OR15-9A0A0B4J2B8 117 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 A0A1W2PQD8 194 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 FAM205CA6NFA0 338 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 PLK4O00444 970 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 PPEF2O14830 753 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 SPATA31C1P0DKV0 1188 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 MAOBP27338 520 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 NAMPTP43490 491 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 IFNAR2P48551 515 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 GPR15P49685 360 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 GUCY2FP51841 1108 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 BNC1Q01954 994 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 SPAG1Q07617 926 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 SLC10A6Q3KNW5 377 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 MGAT5BQ3V5L5 792 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 SLC39A12Q504Y0 691 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 SEZ6Q53EL9 994 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 ZC2HC1CQ53FD0 456 aaPredicted RBP9.9□□□□□ -0.82
NUP54-211ENST00000512151 EARS2Q5JPH6 523 aaKnown RBP9.9□□□□□ -0.82
NUP54-211ENST00000512151 OVOS1Q6IE37 1185 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 Q6ZUG5 572 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 RABEPKQ7Z6M1 372 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 NEK8Q86SG6 692 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 FMNL3Q8IVF7 1028 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 PGBD3Q8N328 593 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 MCPH1Q8NEM0 835 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 BRF1Q92994 677 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 ACAP3Q96P50 834 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 PNMA5Q96PV4 448 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
NUP54-211ENST00000512151 CD93Q9NPY3 652 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 KCNJ14Q9UNX9 436 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 BTBD3Q9Y2F9 522 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 ANK1P16157 1881 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 TEP1Q99973 2627 aaKnown RBP9.9□□□□□ -0.82
NUP54-211ENST00000512151 TSC2P49815 1807 aa9.9□□□□□ -0.82
NUP54-211ENST00000512151 TEX51A0A1B0GUA7 166 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 WISP1O95388 367 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 KRT10P13645 584 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 GCFC2P16383 781 aaKnown RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 GABRG2P18507 467 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 DDX6P26196 483 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP54-211ENST00000512151 KIR2DL1P43626 348 aaPredicted RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 CLDN6P56747 220 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 CCT2P78371 535 aaKnown RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 SCRN1Q12765 414 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 MYO1EQ12965 1108 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 DMP1Q13316 513 aaPredicted RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 BYSLQ13895 437 aaKnown RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 VEPH1Q14D04 833 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 SMAD1Q15797 465 aaKnown RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 GPR155Q7Z3F1 870 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 USP37Q86T82 979 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 LRRTM3Q86VH5 581 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 CCDC26Q8TAB7 109 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 LRRC15Q8TF66 581 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 KIF2CQ99661 725 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
NUP54-211ENST00000512151 CALCOCO1Q9P1Z2 691 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
NUP54-211ENST00000512151 ZMYM5Q9UJ78 669 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms