RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 RIN3Q8TB24 985 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 WHAMMQ8TF30 809 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 ADAMTS14Q8WXS8 1223 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 DRC1Q96MC2 740 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 GTPBP2Q9BX10 602 aaKnown RBP12.52□□□□□ -0.41
RNF4-216ENST00000511859 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 PCDHB9Q9Y5E1 797 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 SCN1AP35498 2009 aa12.52□□□□□ -0.41
RNF4-216ENST00000511859 KALRNO60229 2985 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 PFKFB2O60825 505 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 CFIP05156 583 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 CCT6AP40227 531 aaKnown RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 ECM1Q16610 540 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 HSF5Q4G112 596 aaPredicted RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 DAW1Q8N136 415 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 RLN3Q8WXF3 142 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 TMEM206Q9H813 350 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 POLMQ9NP87 494 aaPredicted RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 PDRG1Q9NUG6 133 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
RNF4-216ENST00000511859 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 PTPRBP23467 1997 aa12.51□□□□□ -0.41
RNF4-216ENST00000511859 ANAPC1Q9H1A4 1944 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 LACTBL1A8MY62 500 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 SLC16A4O15374 487 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 AP5Z1O43299 807 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 HIP1RO75146 1068 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 ADRB2P07550 413 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 SYPP08247 313 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 USP17L7P0C7H9 530 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CD59P13987 128 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
RNF4-216ENST00000511859 ITPKAP23677 461 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 MATR3P43243 847 aaKnown RBP eCLIP12.5□□□□□ -0.41
RNF4-216ENST00000511859 SMTNP53814 917 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 SEC13P55735 322 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 C19orf57Q0VDD7 668 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 ZNF77Q15935 545 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 SPATA1Q5VX52 437 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 ARMCX6Q7L4S7 300 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CD302Q8IX05 232 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 EFCAB13Q8IY85 973 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 DCP1BQ8IZD4 617 aaKnown RBP12.5□□□□□ -0.41
RNF4-216ENST00000511859 TMEM130Q8N3G9 435 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 MINDY1Q8N5J2 469 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
RNF4-216ENST00000511859 DNM3Q9UQ16 869 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 WNT6Q9Y6F9 365 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 TCHHQ07283 1943 aa12.5□□□□□ -0.41
RNF4-216ENST00000511859 TRAV19A0A0A6YYK7 116 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 PIRO00625 290 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 NFATC1O95644 943 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 OR52Z1P0C646 297 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 TCF3P15923 654 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 PDIA5Q14554 519 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 LRRTM3Q86VH5 581 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 FRMD1Q8N878 549 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 ADAM32Q8TC27 787 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 MYRFLQ96LU7 910 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 TIPINQ9BVW5 301 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
RNF4-216ENST00000511859 ABI2Q9NYB9 513 aaPredicted RBP12.49□□□□□ -0.41
RNF4-216ENST00000511859 BCCIPQ9P287 314 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNF4-216ENST00000511859 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
RNF4-216ENST00000511859 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 KNL1Q8NG31 2342 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
RNF4-216ENST00000511859 PCDH15Q96QU1 1955 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 MYMKA6NI61 221 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 PPEF2O14830 753 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 CKMP06732 381 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 FTH1P19P0C7X4 201 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 OPRD1P41143 372 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF4-216ENST00000511859 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 USP4Q13107 963 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 TRIM29Q14134 588 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 NBR1Q14596 966 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 EOGTQ5NDL2 527 aa12.48□□□□□ -0.41
RNF4-216ENST00000511859 C9orf57Q5W0N0 161 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms