RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CTXN3Q4LDR2 81 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 STRIP1Q5VSL9 837 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 IZUMO3Q5VZ72 239 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 RESP18Q5W5W9 173 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 RINLQ6ZS11 566 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PLEKHH3Q7Z736 793 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ENAHQ8N8S7 591 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 CHST13Q8NET6 341 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SNF8Q96H20 258 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ARMC7Q9H6L4 198 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PLAAQ9Y263 795 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PQBP1O60828 265 aaKnown RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 XYLBO75191 536 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 NFICP08651 508 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TRIM49P0CI25 452 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TRIM49CP0CI26 452 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SKP1P63208 163 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 CEP78Q5JTW2 689 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 KLHL24Q6TFL4 600 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 FBXL16Q8N461 479 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 DPP10Q8N608 796 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TNIP2Q8NFZ5 429 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PNMA5Q96PV4 448 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 RBBP8Q99708 897 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PARVBQ9HBI1 364 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 FLT1P17948 1338 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 A0A087X0T9 212 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PTPN7P35236 360 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SOX11P35716 441 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 BTG3Q14201 252 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 CDR2LQ86X02 465 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 MIB1Q86YT6 1006 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 HERC6Q8IVU3 1022 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 CNPY4Q8N129 248 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 MRPL1Q9BYD6 325 aaKnown RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 LY9Q9HBG7 655 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 GBA2Q9HCG7 927 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 TUFT1Q9NNX1 390 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ANAPC2Q9UJX6 822 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 VPS28Q9UK41 221 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TRIM17Q9Y577 477 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 PCDHB9Q9Y5E1 797 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SPATA31A1Q5TZJ5 1347 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SKAP2O75563 359 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 CAPN1P07384 714 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SCP2P22307 547 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 KCNK10P57789 538 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 EMC2Q15006 297 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SYCP2LQ5T4T6 812 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 C9orf131Q5VYM1 1079 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TTC23Q5W5X9 447 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SIX5Q8N196 739 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 LRRC71Q8N4P6 559 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 MCOLN3Q8TDD5 553 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TMA16Q96EY4 203 aaKnown RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 CGRRF1Q99675 332 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 BCL2L12Q9HB09 334 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ARHGEF3Q9NR81 526 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 RAB6BQ9NRW1 208 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 BLOC1S6Q9UL45 172 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP38-203ENST00000511739 JCADQ9P266 1359 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 DEAF1O75398 565 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 GRAP2O75791 330 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ENDOD1O94919 500 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 AMHP03971 560 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 ALDH2P05091 517 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 VSNL1P62760 191 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 NFIXQ14938 502 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 VPS72Q15906 364 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TBC1D10CQ8IV04 446 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 RIN3Q8TB24 985 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 BLOC1S5Q8TDH9 187 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SLC20A1Q8WUM9 679 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 BCL2L14Q9BZR8 327 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 TRIT1Q9H3H1 467 aaKnown RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 MLXIPLQ9NP71 852 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 DCP1AQ9NPI6 582 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 IMPAD1Q9NX62 359 aa6.01□□□□□ -1.45
USP38-203ENST00000511739 SAE1Q9UBE0 346 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 ZNF70Q9UC06 446 aaPredicted RBP6.01□□□□□ -1.45
USP38-203ENST00000511739 GSG1L2A8MUP6 293 aa6□□□□□ -1.45
USP38-203ENST00000511739 MTSS1O43312 755 aa6□□□□□ -1.45
USP38-203ENST00000511739 AKAP10O43572 662 aa6□□□□□ -1.45
USP38-203ENST00000511739 NBNO60934 754 aa6□□□□□ -1.45
USP38-203ENST00000511739 KRT33AO76009 404 aa6□□□□□ -1.45
USP38-203ENST00000511739 RPLP2P05387 115 aaKnown RBP6□□□□□ -1.45
USP38-203ENST00000511739 GSTM1P09488 218 aa6□□□□□ -1.45
USP38-203ENST00000511739 MYL2P10916 166 aa6□□□□□ -1.45
USP38-203ENST00000511739 VEGFAP15692 232 aaPredicted RBP6□□□□□ -1.45
USP38-203ENST00000511739 RPS12P25398 132 aaKnown RBP6□□□□□ -1.45
USP38-203ENST00000511739 SERPINB3P29508 390 aa6□□□□□ -1.45
USP38-203ENST00000511739 OXCT1P55809 520 aa6□□□□□ -1.45
USP38-203ENST00000511739 FMR1NBQ8N0W7 255 aaPredicted RBP6□□□□□ -1.45
USP38-203ENST00000511739 C1orf54Q8WWF1 131 aa6□□□□□ -1.45
USP38-203ENST00000511739 C1QTNF7Q9BXJ2 289 aa6□□□□□ -1.45
USP38-203ENST00000511739 MOV10L1Q9BXT6 1211 aaKnown RBP6□□□□□ -1.45
USP38-203ENST00000511739 UBXN6Q9BZV1 441 aa6□□□□□ -1.45
USP38-203ENST00000511739 REXO4Q9GZR2 422 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms