RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 BFSP2Q13515 415 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 TRIML2Q8N7C3 387 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 ATP8B4Q8TF62 1192 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
NEK1-207ENST00000511633 CENPKQ9BS16 269 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 MRPL40Q9NQ50 206 aaKnown RBP9.44□□□□□ -0.9
NEK1-207ENST00000511633 CISHQ9NSE2 258 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 KIF17Q9P2E2 1029 aa9.44□□□□□ -0.9
NEK1-207ENST00000511633 CXCL11O14625 94 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 PSTPIP1O43586 416 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 SLITRK3O94933 977 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 AKAP5P24588 427 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 MDH1P40925 334 aaKnown RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 SLC11A2P49281 568 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 CTCFP49711 727 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 ERFP50548 548 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 FBXW4P57775 412 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 STX3Q13277 289 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 LAMB3Q13751 1172 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 DNAAF5Q86Y56 855 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 FAM172AQ8WUF8 416 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.43□□□□□ -0.92e-7■■■■■ 32.7
NEK1-207ENST00000511633 XAB2Q9HCS7 855 aaKnown RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 RNF103-CHMP3A0A140T963 221 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 NKRFO15226 690 aaKnown RBP eCLIP9.43□□□□□ -0.9
NEK1-207ENST00000511633 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 POMCP01189 267 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 MYL2P10916 166 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 MBL2P11226 248 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 SPRP35270 261 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 SH3BGRP55822 239 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 VGLL2Q8N8G2 317 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 TMC2Q8TDI7 906 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 LZICQ8WZA0 190 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 YME1L1Q96TA2 773 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 NOP53Q9NZM5 478 aaKnown RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 PCDHGB4Q9UN71 923 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 CLCA2Q9UQC9 943 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 TIMM13Q9Y5L4 95 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 F8VZ95 297 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 KRT4P19013 534 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 CSE1LP55060 971 aaKnown RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 ZNF177Q13360 481 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 ZBTB39O15060 712 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 PDCD2Q16342 344 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 MROH9Q5TGP6 573 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 TTC39BQ5VTQ0 682 aaPredicted RBP9.43□□□□□ -0.9
NEK1-207ENST00000511633 NAPEPLDQ6IQ20 393 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 SNX31Q8N9S9 440 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 SEPT8Q92599 483 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 TMEM176AQ96HP8 235 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 PPP1R2P1Q96PQ5 205 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 PCDHAC2Q9Y5I4 1007 aa9.43□□□□□ -0.9
NEK1-207ENST00000511633 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 SLC2A3P11169 496 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 CHRM3P20309 590 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 DNAJB2P25686 324 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 PPP3CCP48454 512 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 BCAT1P54687 386 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 VGLL4Q14135 290 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 CENPPQ6IPU0 288 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 SHCBP1Q8NEM2 672 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 CALML6Q8TD86 181 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ASPSCR1Q9BZE9 553 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ING2Q9H160 280 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 FAM198AQ9UFP1 575 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 SLC39A10Q9ULF5 831 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 FAM47DPA6NHR8 397 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 F5H5T6 163 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ANGPT2O15123 496 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 RRM1P23921 792 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 RARRES1P49788 294 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 MAPRE2Q15555 327 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 SV2AQ7L0J3 742 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 PTF1AQ7RTS3 328 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 TLK2Q86UE8 772 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 EMC1Q8N766 993 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 REPS2Q8NFH8 660 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 TATDN2Q93075 761 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 KDM4CQ9H3R0 1056 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ADGRA2Q96PE1 1338 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ARHGAP23Q9P227 1491 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 ARHGAP10A1A4S6 786 aa9.42□□□□□ -0.9
NEK1-207ENST00000511633 MTSS1O43312 755 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms