RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 GEN1Q17RS7 908 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 DAW1Q8N136 415 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 DNAAF3Q8N9W5 541 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 UBA3Q8TBC4 463 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 TMC2Q8TDI7 906 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 NSUN6Q8TEA1 469 aaKnown RBP15.58■□□□□ 0.08
USP38-202ENST00000510377 ALKBH8Q96BT7 664 aaKnown RBP15.58■□□□□ 0.08
USP38-202ENST00000510377 ZNF570Q96NI8 536 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 NKX1-2Q9UD57 310 aaPredicted RBP15.58■□□□□ 0.08
USP38-202ENST00000510377 STRIP2Q9ULQ0 834 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 ZMYM2Q9UBW7 1377 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 PAPOLAP51003 745 aaKnown RBP15.58■□□□□ 0.08
USP38-202ENST00000510377 AQP5P55064 265 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 FAAP100Q0VG06 881 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 MAMLD1Q13495 774 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 TRIP10Q15642 601 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 IZUMO2Q6UXV1 221 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 ZCCHC23Q6ZST2 131 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 ZNF354CQ86Y25 554 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 GPATCH2LQ9NWQ4 482 aa15.58■□□□□ 0.08
USP38-202ENST00000510377 MEI4A8MW99 385 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 EDF1O60869 148 aaKnown RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 P4HA1P13674 534 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 PDK4Q16654 411 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ZDHHC14Q8IZN3 488 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 RNF149Q8NC42 400 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 RFWD2Q8NHY2 731 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 SYTL5Q8TDW5 730 aaPredicted RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 TMEM109Q9BVC6 243 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 FAM237BA0A1B0GVD1 139 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 PDGFRAP16234 1089 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ARL1P40616 181 aaPredicted RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 MYL6P60660 151 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 DGKZQ13574 1117 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 MAPK6Q16659 721 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 C15orf52Q6ZUT6 534 aaKnown RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 POU5F2Q8N7G0 328 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ATG4CQ96DT6 458 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 BTBD10Q9BSF8 475 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 DENND2DQ9H6A0 471 aaPredicted RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 ANKEF1Q9NU02 776 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ASNSD1Q9NWL6 643 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 SIPA1L3O60292 1781 aaPredicted RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 CCDC78A2IDD5 438 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 HNRNPCL1O60812 293 aaKnown RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 HSPA4LO95757 839 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 CETPP11597 493 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 OSBPP22059 807 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 ASPHQ12797 758 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 NBPF20Q3BBV1 942 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 HELQQ8TDG4 1101 aa15.57■□□□□ 0.08
USP38-202ENST00000510377 RPF1Q9H9Y2 349 aaKnown RBP15.57■□□□□ 0.08
USP38-202ENST00000510377 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.57■□□□□ 0.08
USP38-202ENST00000510377 LIASO43766 372 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 GPC3P51654 580 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 PRAMEF18Q5VWM3 479 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 LRRC74BQ6ZQY2 392 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 CDHR1Q96JP9 859 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 SLC24A2Q9UI40 661 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 MYH3P11055 1940 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 ICAM1P05362 532 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 SNRPAP09012 282 aaKnown RBP15.56■□□□□ 0.08
USP38-202ENST00000510377 GCNT1Q02742 428 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 WASHC2DQ5SRD0 308 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 TMEM161BQ8NDZ6 487 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 PLEKHO2Q8TD55 490 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 SLC16A10Q8TF71 515 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 DHX35Q9H5Z1 703 aaKnown RBP15.56■□□□□ 0.08
USP38-202ENST00000510377 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
USP38-202ENST00000510377 ARHGEF3Q9NR81 526 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 PIH1D1Q9NWS0 290 aaKnown RBP15.56■□□□□ 0.08
USP38-202ENST00000510377 IRAK4Q9NWZ3 460 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 INPP5FQ9Y2H2 1132 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 TIAM2Q8IVF5 1701 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 DPPA5A6NC42 116 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 KBTBD13C9JR72 458 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 RAP1GAPP47736 663 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 GTF2BQ00403 316 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 LRRC71Q8N4P6 559 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 GLIS1Q8NBF1 620 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 TIPINQ9BVW5 301 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 ARL8BQ9NVJ2 186 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 C2CD2Q9Y426 696 aa15.56■□□□□ 0.08
USP38-202ENST00000510377 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
USP38-202ENST00000510377 NEMP1O14524 444 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 SH3BP5LQ7L8J4 393 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 DCLK2Q8N568 766 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 EPB41L4BQ9H329 900 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 NUP98P52948 1817 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 KBTBD12Q3ZCT8 623 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 XKR3Q5GH77 459 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 C4orf19Q8IY42 314 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 CEP70Q8NHQ1 597 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 SEC14L1Q92503 715 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 PCDH9Q9HC56 1237 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 CYP26B1Q9NR63 512 aa15.55■□□□□ 0.08
USP38-202ENST00000510377 ZMYND8Q9ULU4 1186 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms