RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 PTK6Q13882 451 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 QPCTQ16769 361 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 FAM26DQ5JW98 314 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 ZBTB41Q5SVQ8 909 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 NOTUMQ6P988 496 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 TAOK1Q7L7X3 1001 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 CABS1Q96KC9 395 aa16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 PIN4Q9Y237 131 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-213ENST00000510187 FAM170AA1A519 330 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 H0YHG0 523 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 RASGRF2O14827 1237 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 FAM189A1O60320 539 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 CD4P01730 458 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 CYP1A1P04798 512 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 DLATP10515 647 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 MCF2P10911 925 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 AXLP30530 894 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 LACTB2Q53H82 288 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 WDR44Q5JSH3 913 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 ICE2Q659A1 982 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 CRELD2Q6UXH1 353 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 CPLX4Q7Z7G2 160 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 THNSL1Q8IYQ7 743 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 ZNF317Q96PQ6 595 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 ADAM7Q9H2U9 754 aa16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.96■□□□□ 0.314e-7■■■■□ 22.8
SQSTM1-213ENST00000510187 RBAKQ9NYW8 714 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-213ENST00000510187 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 GAS8O95995 478 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 GHRP10912 638 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 CHN1P15882 459 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 TNFSF9P41273 254 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 OSTNP61366 133 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 KRT17Q04695 432 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 NFX1Q12986 1120 aaKnown RBP16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 ZACNQ401N2 412 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 FBXO47Q5MNV8 452 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 RHBDF2Q6PJF5 856 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 ANKRD33Q7Z3H0 272 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 CPNE8Q86YQ8 564 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 SNF8Q96H20 258 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 VCPIP1Q96JH7 1222 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 C11orf49Q9H6J7 331 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.3
SQSTM1-213ENST00000510187 GPR182O15218 404 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 PSTPIP1O43586 416 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 PROSCO94903 275 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 ATP5DP30049 168 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 NSFP46459 744 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 BFSP2Q13515 415 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 KCTD19Q17RG1 926 aaPredicted RBP16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 LIN9Q5TKA1 542 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 SMYD5Q6GMV2 418 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 SLC27A1Q6PCB7 646 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 CEP120Q8N960 986 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 SERPINB12Q96P63 405 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 SELENOSQ9BQE4 189 aa16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 AGO3Q9H9G7 860 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 KIAA0100Q14667 2235 aaKnown RBP16.95■□□□□ 0.3
SQSTM1-213ENST00000510187 TLDC2A0PJX2 215 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 NPTXRO95502 500 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 HNRNPH1P31943 449 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 KCNJ1P48048 391 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 AUHQ13825 339 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 ITIH4Q14624 930 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 LPIN1Q14693 890 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 DCAF4L1Q3SXM0 396 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 C1orf53Q5VUE5 145 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 MON1BQ7L1V2 547 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 CCDC13Q8IYE1 715 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 BBOF1Q8ND07 529 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 MDM1Q8TC05 714 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 FNBP1Q96RU3 617 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 DCLK3Q9C098 648 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 KDM4CQ9H3R0 1056 aa16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 INTS9Q9NV88 658 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 CPSF3Q9UKF6 684 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-213ENST00000510187 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 C4BPAP04003 597 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 STAG3L1P0CL83 205 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CD52P31358 61 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TLE2Q04725 743 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ANKRD20A8PQ5CZ79 823 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 FBXW10Q5XX13 1052 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TRAF7Q6Q0C0 670 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CEP128Q6ZU80 1094 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 LRRC8DQ7L1W4 858 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 BRSK2Q8IWQ3 736 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 CCDC197Q8NCU1 140 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 ZNF516Q92618 1163 aa16.93■□□□□ 0.3
SQSTM1-213ENST00000510187 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms