RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 GOLGA7BQ2TAP0 167 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 USP41Q3LFD5 358 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 INTS6LQ5JSJ4 861 aaKnown RBP17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 C9orf50Q5SZB4 431 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 FAM171A1Q5VUB5 890 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 ZDHHC17Q8IUH5 632 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 HERC6Q8IVU3 1022 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 RABGGTAQ92696 567 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 ZNF653Q96CK0 615 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 IGSF21Q96ID5 467 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 TTPALQ9BTX7 342 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 MARCH5Q9NX47 278 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 SPG21Q9NZD8 308 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 SSX2IPQ9Y2D8 614 aa17.71■□□□□ 0.43
SCAMP1-203ENST00000510030 ITGB1P05556 798 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 ABCB4P21439 1286 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 LMO2P25791 158 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 ARHGAP25P42331 645 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 ACADSBP45954 432 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 NAP1L1P55209 391 aaKnown RBP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 GSCP56915 257 aaPredicted RBP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 KRT17Q04695 432 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 OSTM1Q86WC4 334 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 PALB2Q86YC2 1186 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 PASD1Q8IV76 773 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 MCOLN2Q8IZK6 566 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 SMARCD1Q96GM5 515 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 FUBP3Q96I24 572 aaKnown RBP eCLIP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 C16orf45Q96MC5 204 aaPredicted RBP17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 LACRTQ9GZZ8 138 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 FAM49BQ9NUQ9 324 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 PARVAQ9NVD7 372 aa17.7■□□□□ 0.42
SCAMP1-203ENST00000510030 PTPRSQ13332 1948 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 I3L4J1 428 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 MTA2O94776 668 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 CYP1A2P05177 515 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 FAM200BP0CF97 657 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 GPD2P43304 727 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 GNG11P61952 73 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 PDCLQ13371 301 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 ORC1Q13415 861 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 VARS2Q5ST30 1063 aaKnown RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 KIAA1841Q6NSI8 718 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 SLC39A11Q8N1S5 342 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 C17orf53Q8N3J3 647 aaPredicted RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 SLC2A14Q8TDB8 520 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 C2orf15Q8WU43 125 aaKnown RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 CPA5Q8WXQ8 436 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 HSFY1Q96LI6 401 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 ZSWIM1Q9BR11 485 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 MED10Q9BTT4 135 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 DPEP3Q9H4B8 488 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 CTTNBP2NLQ9P2B4 639 aa17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 CNOT8Q9UFF9 292 aaKnown RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
SCAMP1-203ENST00000510030 MACROD2A1Z1Q3 448 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 XPO1O14980 1071 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 TLL1O43897 1013 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 SOD2P04179 222 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 NPR3P17342 541 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 DESP17661 470 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 TKTP29401 623 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 NOP2P46087 812 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 MRPL58Q14197 206 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 CTXN3Q4LDR2 81 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 PKDCCQ504Y2 493 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 MDH1BQ5I0G3 518 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 RASIP1Q5U651 963 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 DENND1BQ6P3S1 775 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 FAM171BQ6P995 826 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 CLP1Q92989 425 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 C18orf8Q96DM3 657 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 PACSIN1Q9BY11 444 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 DUSP16Q9BY84 665 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 THAP2Q9H0W7 228 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 ABCB6Q9NP58 842 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 TAS2R14Q9NYV8 317 aa17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
SCAMP1-203ENST00000510030 RCCD1A6NED2 376 aa17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 SART1O43290 800 aaKnown RBP17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 TNNT1P13805 278 aa17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 ACAT1P24752 427 aaKnown RBP17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 SCNN1AP37088 669 aa17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 GABRB2P47870 512 aa17.67■□□□□ 0.42
SCAMP1-203ENST00000510030 EPHB4P54760 987 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms