RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CTNND2Q9UQB3 1225 aa15.69■□□□□ 0.1
HMGCL-208ENST00000509389 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
HMGCL-208ENST00000509389 BECN2A8MW95 431 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 GOLGA6L19H0YKK7 550 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 IL18RAPO95256 599 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 CHRNB1P11230 501 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 TDGF1P13385 188 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 ATF6P18850 670 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 STIM1Q13586 685 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 MGAT5BQ3V5L5 792 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 ARHGAP15Q53QZ3 475 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 WSCD1Q658N2 575 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 LRRTM3Q86VH5 581 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 ZC3H3Q8IXZ2 948 aaKnown RBP15.68■□□□□ 0.1
HMGCL-208ENST00000509389 GLIS3Q8NEA6 775 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 IER2Q9BTL4 223 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 FAM126AQ9BYI3 521 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-208ENST00000509389 EPC1Q9H2F5 836 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 TBC1D7Q9P0N9 293 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 NCDNQ9UBB6 729 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 NFE2L3Q9Y4A8 694 aa15.68■□□□□ 0.1
HMGCL-208ENST00000509389 SLC38A8A6NNN8 435 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 KPNA7A9QM74 516 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 DPYSL4O14531 572 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 EIF3DO15371 548 aaKnown RBP eCLIP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 SOX9P48436 509 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 PMS1P54277 932 aaKnown RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 WNT7BP56706 349 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 VEPH1Q14D04 833 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 APTXQ7Z2E3 356 aaKnown RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 NT5DC4Q86YG4 428 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 ZSWIM2Q8NEG5 633 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 C2orf15Q8WU43 125 aaKnown RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 SCFD1Q8WVM8 642 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 MSANTD3Q96H12 275 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 ACCSQ96QU6 501 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 DUSP9Q99956 384 aaKnown RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 FAM213AQ9BRX8 229 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 C8orf33Q9H7E9 229 aaPredicted RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 IL21Q9HBE4 155 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 SLC39A2Q9NP94 309 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 SMG5Q9UPR3 1016 aaKnown RBP15.67■□□□□ 0.1
HMGCL-208ENST00000509389 EXOC7Q9UPT5 735 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 DENND4CQ5VZ89 1909 aa15.67■□□□□ 0.1
HMGCL-208ENST00000509389 KIF26AQ9ULI4 1882 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-208ENST00000509389 HAPLN1P10915 354 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-208ENST00000509389 WEE1P30291 646 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 CCR3P51677 355 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 CASP5P51878 434 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 KPNA1P52294 538 aaPredicted RBP15.66■□□□□ 0.1
HMGCL-208ENST00000509389 CYP4F8P98187 520 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 LRRC63Q05C16 580 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 SMARCB1Q12824 385 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 GAS6Q14393 721 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 SV2CQ496J9 727 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 ARHGAP29Q52LW3 1261 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 TTC8Q8TAM2 541 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 ZNF507Q8TCN5 953 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 SPPL2BQ8TCT7 592 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 GIPC2Q8TF65 315 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 SAAL1Q96ER3 474 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 ZFYVE19Q96K21 471 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 KCTD10Q9H3F6 313 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 TASP1Q9H6P5 420 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 OBP2AQ9NY56 170 aa15.66■□□□□ 0.1
HMGCL-208ENST00000509389 BICDL2A1A5D9 508 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 MYBPHLA2RUH7 354 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TULP1O00294 542 aaPredicted RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 GCNT3O95395 438 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 PRAMEF12O95522 483 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 CDC25CP30307 473 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 HOXD13P35453 343 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 PNPLA4P41247 253 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 NRLP54845 237 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TFAMQ00059 246 aaKnown RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 SATB1Q01826 763 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 PPP2R5DQ14738 602 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TAF12Q16514 161 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 WDR44Q5JSH3 913 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 KLHL10Q6JEL2 608 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 C1orf228Q6PIY5 440 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TXNDC11Q6PKC3 985 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 BRSK2Q8IWQ3 736 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 DCP1BQ8IZD4 617 aaKnown RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TMEM174Q8WUU8 243 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 SLC46A2Q9BY10 475 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 RBM12Q9NTZ6 932 aaKnown RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 TMLHEQ9NVH6 421 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 FANCLQ9NW38 375 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 ABI2Q9NYB9 513 aaPredicted RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 GTSE1Q9NYZ3 720 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 PCDHB13Q9Y5F0 798 aa15.65■□□□□ 0.1
HMGCL-208ENST00000509389 ZNF638Q14966 1978 aaKnown RBP15.65■□□□□ 0.1
HMGCL-208ENST00000509389 OBSL1O75147 1896 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 TRIM49BA6NDI0 452 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 SPECC1L-ADORA2AF8WAN1 911 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 KIF20AO95235 890 aa15.64■□□□□ 0.09
HMGCL-208ENST00000509389 LDHAP00338 332 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms