RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 NENFQ9UMX5 172 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PPP2R2CQ9Y2T4 447 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PCDHA13Q9Y5I0 950 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 ANKRD62A6NC57 917 aa11□□□□□ -0.65
RFC1-211ENST00000509084 KRT86O43790 486 aa11□□□□□ -0.65
RFC1-211ENST00000509084 MICAL2O94851 1124 aa11□□□□□ -0.65
RFC1-211ENST00000509084 URODP06132 367 aa11□□□□□ -0.65
RFC1-211ENST00000509084 RB1P06400 928 aa11□□□□□ -0.65
RFC1-211ENST00000509084 MYBL1P10243 752 aa11□□□□□ -0.65
RFC1-211ENST00000509084 ACAT1P24752 427 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 BMP8BP34820 402 aa11□□□□□ -0.65
RFC1-211ENST00000509084 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 UBE3AQ05086 875 aa11□□□□□ -0.65
RFC1-211ENST00000509084 BST2Q10589 180 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 KIF5AQ12840 1032 aa11□□□□□ -0.65
RFC1-211ENST00000509084 ORC1Q13415 861 aa11□□□□□ -0.65
RFC1-211ENST00000509084 GOLGA7BQ2TAP0 167 aa11□□□□□ -0.65
RFC1-211ENST00000509084 CTXN3Q4LDR2 81 aa11□□□□□ -0.65
RFC1-211ENST00000509084 ARHGAP29Q52LW3 1261 aa11□□□□□ -0.65
RFC1-211ENST00000509084 C9orf50Q5SZB4 431 aa11□□□□□ -0.65
RFC1-211ENST00000509084 PPP1R26Q5T8A7 1209 aaPredicted RBP11□□□□□ -0.65
RFC1-211ENST00000509084 ACAD10Q6JQN1 1059 aa11□□□□□ -0.65
RFC1-211ENST00000509084 FAM171BQ6P995 826 aa11□□□□□ -0.65
RFC1-211ENST00000509084 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
RFC1-211ENST00000509084 CEP57Q86XR8 500 aa11□□□□□ -0.65
RFC1-211ENST00000509084 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
RFC1-211ENST00000509084 MYCBPAPQ8TBZ2 947 aa11□□□□□ -0.65
RFC1-211ENST00000509084 IPO4Q8TEX9 1081 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 STK32AQ8WU08 396 aa11□□□□□ -0.65
RFC1-211ENST00000509084 C2orf15Q8WU43 125 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 BCL7CQ8WUZ0 217 aaPredicted RBP11□□□□□ -0.65
RFC1-211ENST00000509084 CTNNBL1Q8WYA6 563 aaPredicted RBP11□□□□□ -0.65
RFC1-211ENST00000509084 CALR3Q96L12 384 aaKnown RBP11□□□□□ -0.65
RFC1-211ENST00000509084 PCDHB18PQ96TA0 734 aa11□□□□□ -0.65
RFC1-211ENST00000509084 RTP3Q9BQQ7 232 aa11□□□□□ -0.65
RFC1-211ENST00000509084 MED10Q9BTT4 135 aa11□□□□□ -0.65
RFC1-211ENST00000509084 CYLDQ9NQC7 956 aa11□□□□□ -0.65
RFC1-211ENST00000509084 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11□□□□□ -0.65
RFC1-211ENST00000509084 CHST7Q9NS84 486 aa11□□□□□ -0.65
RFC1-211ENST00000509084 FAM49BQ9NUQ9 324 aa11□□□□□ -0.65
RFC1-211ENST00000509084 STRIP2Q9ULQ0 834 aa11□□□□□ -0.65
RFC1-211ENST00000509084 LZTS1Q9Y250 596 aa11□□□□□ -0.65
RFC1-211ENST00000509084 BACE2Q9Y5Z0 518 aa11□□□□□ -0.65
RFC1-211ENST00000509084 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 C5orf67F2Z3F1 127 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 ZNF263O14978 683 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 PJA2O43164 708 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 FGF18O76093 207 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CALB1P05937 261 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 TMEM253P0C7T8 217 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 LINC00271P0C7V0 271 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 FAM200BP0CF97 657 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CCDC130P13994 396 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CTNNB1P35222 781 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 RGS19P49795 217 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CYP27A1Q02318 531 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 DSG1Q02413 1049 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 RAB30Q15771 203 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 PSMD5Q16401 504 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 MDH1BQ5I0G3 518 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 LIN9Q5TKA1 542 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 NAA35Q5VZE5 725 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 FAM35AQ86V20 835 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 PHF13Q86YI8 300 aaPredicted RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 PASD1Q8IV76 773 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CCAR2Q8N163 923 aaKnown RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 ANKRD52Q8NB46 1076 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 C1orf131Q8NDD1 294 aaKnown RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 OR10T2Q8NGX3 314 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 SLC2A14Q8TDB8 520 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 MYLPFQ96A32 169 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 SMARCD1Q96GM5 515 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 PCED1BQ96HM7 432 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 FUBP3Q96I24 572 aaKnown RBP eCLIP10.99□□□□□ -0.65
RFC1-211ENST00000509084 ZSWIM1Q9BR11 485 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 C11orf84Q9BUA3 381 aaPredicted RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 ZCWPW1Q9H0M4 648 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 CRTAC1Q9NQ79 661 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 MTRRQ9UBK8 725 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 GTF3C4Q9UKN8 822 aa10.99□□□□□ -0.65
RFC1-211ENST00000509084 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
RFC1-211ENST00000509084 NLRC5Q86WI3 1866 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 VWA8A3KMH1 1905 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 A0A0A6YYK5 440 aaPredicted RBP10.98□□□□□ -0.65
RFC1-211ENST00000509084 LINC01553A4QN01 128 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 BTNL10A8MVZ5 291 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 TMCO5BA8MYB1 307 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 ESPNB1AK53 854 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 H0YGN5 161 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 XPO1O14980 1071 aaKnown RBP10.98□□□□□ -0.65
RFC1-211ENST00000509084 HCRTO43612 131 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 TBC1D4O60343 1298 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 ATP2C2O75185 946 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 CALCAP01258 141 aa10.98□□□□□ -0.65
RFC1-211ENST00000509084 FTLP02792 175 aaPredicted RBP10.98□□□□□ -0.65
RFC1-211ENST00000509084 CPB1P15086 417 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms