RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 KAZNQ674X7 775 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 OR56A3Q8NH54 315 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 TRIM43Q96BQ3 446 aaPredicted RBP8.71□□□□□ -1.02
CHD1-205ENST00000508756 PTDSS2Q9BVG9 487 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 ZNF518BQ9C0D4 1074 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 KIAA1586Q9HCI6 787 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 DDX21Q9NR30 783 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD1-205ENST00000508756 OGDHLQ9ULD0 1010 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 TBC1D30Q9Y2I9 924 aa8.71□□□□□ -1.02
CHD1-205ENST00000508756 MRPS17Q9Y2R5 130 aaKnown RBP8.71□□□□□ -1.02
CHD1-205ENST00000508756 KIF3BO15066 747 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 LMNAP02545 664 aaKnown RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 SP2Q02086 613 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 RGS7BPQ6MZT1 257 aaPredicted RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 PEG10Q86TG7 708 aaKnown RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 SESTD1Q86VW0 696 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 SLC9A6Q92581 669 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 TTC17Q96AE7 1141 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 FKBP10Q96AY3 582 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 PDLIM2Q96JY6 352 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 SYNPO2LQ9H987 977 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 ZNF287Q9HBT7 754 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 KLC4Q9NSK0 619 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 AFF4Q9UHB7 1163 aaKnown RBP8.7□□□□□ -1.02
CHD1-205ENST00000508756 FAM50BQ9Y247 325 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 SSX2IPQ9Y2D8 614 aa8.7□□□□□ -1.02
CHD1-205ENST00000508756 WDR27A2RRH5 827 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 CYP2C9P11712 490 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 PPIFP30405 207 aaKnown RBP8.69□□□□□ -1.02
CHD1-205ENST00000508756 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 SLC44A4Q53GD3 710 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 ICE2Q659A1 982 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 NELL2Q99435 816 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 COL20A1Q9P218 1284 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 DKK3Q9UBP4 350 aa8.69□□□□□ -1.02
CHD1-205ENST00000508756 NDRG4Q9ULP0 352 aaKnown RBP8.69□□□□□ -1.02
CHD1-205ENST00000508756 XRCC6P12956 609 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHD1-205ENST00000508756 RPS16P62249 146 aaKnown RBP8.68□□□□□ -1.02
CHD1-205ENST00000508756 KRT17Q04695 432 aa8.68□□□□□ -1.02
CHD1-205ENST00000508756 NBPF8Q3BBV2 869 aa8.68□□□□□ -1.02
CHD1-205ENST00000508756 PLA1AQ53H76 456 aa8.68□□□□□ -1.02
CHD1-205ENST00000508756 SFRP4Q6FHJ7 346 aaPredicted RBP8.68□□□□□ -1.02
CHD1-205ENST00000508756 GAS2L3Q86XJ1 694 aa8.68□□□□□ -1.02
CHD1-205ENST00000508756 NMD3Q96D46 503 aaKnown RBP8.68□□□□□ -1.02
CHD1-205ENST00000508756 CXorf36Q9H7Y0 433 aa8.68□□□□□ -1.02
CHD1-205ENST00000508756 A1CFQ9NQ94 594 aaKnown RBP8.68□□□□□ -1.02
CHD1-205ENST00000508756 KIAA0355O15063 1070 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 GNALP38405 381 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 MYO1EQ12965 1108 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 TBCCQ15814 346 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 PRR16Q569H4 304 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 ZDHHC24Q6UX98 284 aa8.67□□□□□ -1.02
CHD1-205ENST00000508756 PYCARD-AS1I3L0S3 204 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 PQBP1O60828 265 aaKnown RBP8.66□□□□□ -1.02
CHD1-205ENST00000508756 ERBB2P04626 1255 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 ELFN1P0C7U0 828 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 LRPAP1P30533 357 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 CLK3P49761 638 aaKnown RBP8.66□□□□□ -1.02
CHD1-205ENST00000508756 RARRES1P49788 294 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 SATB1Q01826 763 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 MGAT5BQ3V5L5 792 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 COBLL1Q53SF7 1204 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 MAVSQ7Z434 540 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 SIMC1Q8NDZ2 872 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 ATG4AQ8WYN0 398 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 RFKQ969G6 155 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 PBKQ96KB5 322 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 SARGQ9BW04 601 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 STK31Q9BXU1 1019 aa8.66□□□□□ -1.02
CHD1-205ENST00000508756 MBD3L4A6NDZ8 208 aaPredicted RBP8.65□□□□□ -1.02
CHD1-205ENST00000508756 MBD3L3A6NE82 208 aaPredicted RBP8.65□□□□□ -1.02
CHD1-205ENST00000508756 LINC00473A8K010 186 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 NR2F6P10588 404 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 BMP5P22003 454 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 GRIA3P42263 894 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 E2F2Q14209 437 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 ERCC6LQ2NKX8 1250 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
CHD1-205ENST00000508756 BPIFB1Q8TDL5 484 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 ALG8Q9BVK2 526 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 NUP62CLQ9H1M0 184 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 SLITRK6Q9H5Y7 841 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 ZNHIT2Q9UHR6 403 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 PAXBP1Q9Y5B6 917 aa8.65□□□□□ -1.02
CHD1-205ENST00000508756 APAF1O14727 1248 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 CSF1RP07333 972 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 KCNA3P22001 575 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 KLRC1P26715 233 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 PTH2RP49190 550 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 CLCN2P51788 898 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 DGKEP52429 567 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 DTX2Q86UW9 622 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 KRT78Q8N1N4 520 aa8.64□□□□□ -1.03
CHD1-205ENST00000508756 BTBD1Q9H0C5 482 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms