RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NSFP46459 744 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF132P52740 706 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 BEX3Q00994 111 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 SURF1Q15526 300 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 SGSM1Q2NKQ1 1148 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 LIN9Q5TKA1 542 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 EXOC3L1Q86VI1 746 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 MCOLN2Q8IZK6 566 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 RIBC1Q8N443 379 aaPredicted RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CCDC89Q8N998 374 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 C1orf127Q8N9H9 656 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 EPS8L3Q8TE67 593 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 ARHGEF2Q92974 986 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 ANKRD36BP1Q96IX9 119 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 VCPIP1Q96JH7 1222 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CDC42EP4Q9H3Q1 356 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 SAGE1Q9NXZ1 904 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 ASIC3Q9UHC3 531 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 KAT6AQ92794 2004 aa11.63□□□□□ -0.55
SH3RF1-203ENST00000508685 TNPO2O14787 897 aaKnown RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 PSTPIP1O43586 416 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 SNX3O60493 162 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 TRPA1O75762 1119 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ITGB3P05106 788 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ATF2P15336 505 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 RAP1GAPP47736 663 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 NOMO3P69849 1222 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 NR1H3Q13133 447 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 STAT4Q14765 748 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 MON1BQ7L1V2 547 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 CCDC63Q8NA47 563 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ELAC2Q9BQ52 826 aaKnown RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 LRRC4CQ9HCJ2 640 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 MRPL47Q9HD33 250 aaKnown RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 POLIQ9UNA4 740 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 USP15Q9Y4E8 981 aaPredicted RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 MROH7Q68CQ1 1323 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 SMIM23A6NLE4 172 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 IL18RAPO95256 599 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 HSPA8P11142 646 aaKnown RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 MFSD10Q14728 455 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 CCNG2Q16589 344 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 WDR72Q3MJ13 1102 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 PPP1R21Q6ZMI0 780 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ARHGEF18Q6ZSZ5 1173 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 CCDC25Q86WR0 208 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF606Q8WXB4 792 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 OSMRQ99650 979 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 C11orf70Q9BRQ4 267 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 DCLK3Q9C098 648 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 CXCL16Q9H2A7 254 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 LGALS13Q9UHV8 139 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ANAPC7Q9UJX3 599 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 ANAPC5Q9UJX4 755 aa11.62□□□□□ -0.55
SH3RF1-203ENST00000508685 NRCAMQ92823 1304 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 TCRBV7S2A1N4TA0A589 114 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 GPR32O75388 356 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 ALDH1A1P00352 501 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 BRD2P25440 801 aaKnown RBP11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 RGS2P41220 211 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 KCNJ1P48048 391 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 LBX1P52954 281 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF200P98182 395 aaPredicted RBP11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 DAB2IPQ5VWQ8 1189 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 ZNF410Q86VK4 478 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 GIMAP7Q8NHV1 300 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 CXorf38Q8TB03 319 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 CKAP2Q8WWK9 683 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 APBA2Q99767 749 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 PPCSQ9HAB8 311 aa11.61□□□□□ -0.55
SH3RF1-203ENST00000508685 MBLAC1A4D2B0 266 aaPredicted RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 RRN3P2A6NIE6 340 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 CDH16O75309 829 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 PROSCO94903 275 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 OAS1P00973 400 aaKnown RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ABHD2P08910 425 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 CYP2C9P11712 490 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 IVDP26440 423 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 HOXA11P31270 313 aaPredicted RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ADCY8P40145 1251 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 CDH8P55286 799 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ELF3P78545 371 aaPredicted RBP11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ORC1Q13415 861 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TMEM40Q8WWA1 233 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 TFAP2BQ92481 460 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ARHGAP39Q9C0H5 1083 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 ZFYVE28Q9HCC9 887 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 CD248Q9HCU0 757 aa11.6□□□□□ -0.55
SH3RF1-203ENST00000508685 AAASQ9NRG9 546 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms