RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 STK38Q15208 465 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 NAIF1Q69YI7 327 aaPredicted RBP19.23■□□□□ 0.67
SKP2-204ENST00000508514 FSTL4Q6MZW2 842 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 ADGRF2Q8IZF7 708 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 CYP2S1Q96SQ9 504 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 TNMDQ9H2S6 317 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 EBF3Q9H4W6 596 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 TDP1Q9NUW8 608 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
SKP2-204ENST00000508514 PPP6R2O75170 966 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 EHHADHQ08426 723 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 RUNX3Q13761 415 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 PPP2R5DQ14738 602 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 CFAP221Q4G0U5 840 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 TMEM196Q5HYL7 178 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 CNNM4Q6P4Q7 775 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 ZNF507Q8TCN5 953 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
SKP2-204ENST00000508514 HPDLQ96IR7 371 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 GZF1Q9H116 711 aaPredicted RBP19.22■□□□□ 0.67
SKP2-204ENST00000508514 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 POLR3BQ9NW08 1133 aaPredicted RBP19.22■□□□□ 0.67
SKP2-204ENST00000508514 THG1LQ9NWX6 298 aaKnown RBP19.22■□□□□ 0.67
SKP2-204ENST00000508514 HSPBP1Q9NZL4 362 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 OBSL1O75147 1896 aa19.22■□□□□ 0.67
SKP2-204ENST00000508514 ZNF233A6NK53 670 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 SOBPA7XYQ1 873 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 CST3P01034 146 aaPredicted RBP19.21■□□□□ 0.67
SKP2-204ENST00000508514 TMEM191BP0C7N4 346 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 DDX6P26196 483 aaKnown RBP eCLIP19.21■□□□□ 0.67
SKP2-204ENST00000508514 CASP1P29466 404 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 AVPR1AP37288 418 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 LHX1P48742 406 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 ATXN1P54253 815 aaKnown RBP19.21■□□□□ 0.67
SKP2-204ENST00000508514 MYL7Q01449 175 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 HEATR6Q6AI08 1181 aaKnown RBP19.21■□□□□ 0.67
SKP2-204ENST00000508514 SPATA18Q8TC71 538 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 DHX58Q96C10 678 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 GCNT4Q9P109 453 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 ZMYM5Q9UJ78 669 aa19.21■□□□□ 0.67
SKP2-204ENST00000508514 TRDMT1O14717 391 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 HOXA6P31267 233 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 PSMC1P62191 440 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 SPEM2Q0P670 501 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 SIM2Q14190 667 aaPredicted RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 FOXD4L5Q5VV16 416 aaPredicted RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 DPH6Q7L8W6 267 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 LONP2Q86WA8 852 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 SYNPOQ8N3V7 929 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 GPR161Q8N6U8 529 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 SCFD1Q8WVM8 642 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 MRPS31Q92665 395 aaKnown RBP19.2■□□□□ 0.66
SKP2-204ENST00000508514 ANKRD36BP1Q96IX9 119 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 C7orf25Q9BPX7 421 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
SKP2-204ENST00000508514 NCOR2Q9Y618 2525 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 C2orf78A6NCI8 922 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 ZXDBP98169 803 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 DUOXA2Q1HG44 320 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 LAIR1Q6GTX8 287 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 PRR23BQ6ZRT6 265 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 TRAPPC11Q7Z392 1133 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 SPATA2LQ8IUW3 424 aaPredicted RBP19.19■□□□□ 0.66
SKP2-204ENST00000508514 RDH13Q8NBN7 331 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 ZNF516Q92618 1163 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 EZH1Q92800 747 aaPredicted RBP19.19■□□□□ 0.66
SKP2-204ENST00000508514 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
SKP2-204ENST00000508514 FUBP3Q96I24 572 aaKnown RBP eCLIP19.19■□□□□ 0.66
SKP2-204ENST00000508514 SYT15Q9BQS2 421 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 CUEDC2Q9H467 287 aa19.19■□□□□ 0.66
SKP2-204ENST00000508514 EIF3DO15371 548 aaKnown RBP eCLIP19.18■□□□□ 0.66
SKP2-204ENST00000508514 CUTAO60888 179 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 YEATS4O95619 227 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 EGFP01133 1207 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 RETP07949 1114 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 PDGFRBP09619 1106 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 PCSK1P29120 753 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 MAGEA11P43364 429 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 GALK1P51570 392 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 USP46P62068 366 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 ASIC1P78348 528 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 ZNF77Q15935 545 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 WDR49Q8IV35 697 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 SCN4BQ8IWT1 228 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 ARL14EPQ8N8R7 260 aaPredicted RBP19.18■□□□□ 0.66
SKP2-204ENST00000508514 MYLPFQ96A32 169 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 MRPL45Q9BRJ2 306 aaKnown RBP19.18■□□□□ 0.66
SKP2-204ENST00000508514 KIF9Q9HAQ2 790 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 TMEM30AQ9NV96 361 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 GMEB2Q9UKD1 530 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 CDH9Q9ULB4 789 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
SKP2-204ENST00000508514 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.18■□□□□ 0.66
SKP2-204ENST00000508514 CLIC2O15247 247 aa19.17■□□□□ 0.66
SKP2-204ENST00000508514 TNNC2P02585 160 aa19.17■□□□□ 0.66
SKP2-204ENST00000508514 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms