RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 ARMC7Q9H6L4 198 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 KIAA1586Q9HCI6 787 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF804BA4D1E1 1349 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF532Q9HCE3 1301 aa11.29□□□□□ -0.6
PDLIM5-210ENST00000508216 KPNA5O15131 536 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FOXP2O15409 715 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PJA2O43164 708 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 HOXC11O43248 304 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 NUAK1O60285 661 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 DAB1O75553 588 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 HAUS5O94927 633 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ZBTB11O95625 1053 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ZNF23P17027 643 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 HADHAP40939 763 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SLC26A2P50443 739 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SCNN1DP51172 638 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 COPAP53621 1224 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 TBX4P57082 545 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 GHRHRQ02643 423 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ENPEPQ07075 957 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 KRT32Q14532 448 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 POU6F1Q14863 301 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 EFTUD2Q15029 972 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ACAP2Q15057 778 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 USPL1Q5W0Q7 1092 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FAM205BPQ63HN1 556 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FAM91A1Q658Y4 838 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 CLYBLQ8N0X4 340 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FBXL6Q8N531 539 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 OR2W6PQ8NHA6 318 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 CDC26Q8NHZ8 85 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SLC47A1Q96FL8 570 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MAGEB18Q96M61 343 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SNX18Q96RF0 628 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RANBP9Q96S59 729 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ALG1Q9BT22 464 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PITHD1Q9GZP4 211 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MKRN2Q9H000 416 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MTFR1LQ9H019 292 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 TMEM60Q9H2L4 133 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 OR51B5Q9H339 312 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 Q9H521 79 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PAQR5Q9NXK6 330 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 TRPM5Q9NZQ8 1165 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 REV1Q9UBZ9 1251 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 POU2F3Q9UKI9 436 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 KLF2Q9Y5W3 355 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FLT1P17948 1338 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PDPK1O15530 556 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 IFNA14P01570 189 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RRM2P31350 389 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 GRIK1P39086 918 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MAGEA11P43364 429 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 HCAR3P49019 387 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RCAN1P53805 252 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SCRN3Q0VDG4 424 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 ALFQ53S48 1182 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 KIAA1614Q5VZ46 1190 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RNF135Q8IUD6 432 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 FANK1Q8TC84 345 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 TXNDC15Q96J42 360 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RMND5AQ9H871 391 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 HAO1Q9UJM8 370 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 STON1Q9Y6Q2 735 aa11.28□□□□□ -0.6
PDLIM5-210ENST00000508216 A0A1B0GUL6 1792 aa11.27□□□□□ -0.6
PDLIM5-210ENST00000508216 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 GSC2O15499 205 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 TFPTP0C1Z6 253 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ICAM2P13598 275 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 HSPA6P17066 643 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 PLCG1P19174 1290 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 PTX3P26022 381 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 STT3AP46977 705 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 HARS2P49590 506 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 HSD17B7P56937 341 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ERVK-9P63128 1117 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 DAB2P98082 770 aa11.27□□□□□ -0.61
PDLIM5-210ENST00000508216 ALX1Q15699 326 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms